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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
MKPPFQKKSWEDLVDCVKTVQQLDNGKLIAKIKWKNGYVSTHDNIIIHQKCPLKIIEYYE
AHIKFT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6fto-a1-m1-cB 66 66 1.0000 1.0000 1.0000 8.56e-45 6fto-a1-m1-cA_6fto-a1-m1-cB
2 6fto-a1-m1-cA 66 66 1.0000 1.0000 1.0000 8.56e-45 6fto-a1-m1-cA_6fto-a1-m1-cB
3 4f44-a1-m1-cB 83 39 0.1515 0.1205 0.2564 4.4 4f44-a1-m1-cA_4f44-a1-m1-cB
4 4f44-a1-m1-cA 83 39 0.1515 0.1205 0.2564 4.4 4f44-a1-m1-cA_4f44-a1-m1-cB
5 2vr5-a1-m3-cB 714 47 0.2424 0.0224 0.3404 5.3 2vr5-a1-m2-cB_2vr5-a1-m3-cB, 2vr5-a1-m3-cB_2vr5-a1-m2-cA, 2vr5-a1-m3-cB_2vr5-a1-m3-cA
6 2vr5-a1-m2-cB 714 47 0.2424 0.0224 0.3404 5.3 2vr5-a1-m2-cB_2vr5-a1-m3-cB
7 2vnc-a1-m1-cA 699 47 0.2424 0.0229 0.3404 5.4 2vnc-a1-m2-cB_2vnc-a1-m1-cA
8 2vr5-a1-m3-cA 715 47 0.2424 0.0224 0.3404 5.4 2vr5-a1-m3-cB_2vr5-a1-m3-cA
9 2vr5-a1-m2-cA 715 47 0.2424 0.0224 0.3404 5.4 2vr5-a1-m3-cB_2vr5-a1-m2-cA
10 2vnc-a1-m2-cB 666 47 0.2424 0.0240 0.3404 5.5 2vnc-a1-m1-cB_2vnc-a1-m2-cB, 2vnc-a1-m2-cB_2vnc-a1-m1-cA
11 2vnc-a1-m1-cB 666 47 0.2424 0.0240 0.3404 5.5 2vnc-a1-m1-cB_2vnc-a1-m2-cB
12 8abv-a1-m3-cA 244 26 0.1515 0.0410 0.3846 9.3 8abv-a1-m2-cA_8abv-a1-m3-cA
13 8abv-a1-m2-cA 244 26 0.1515 0.0410 0.3846 9.3 8abv-a1-m2-cA_8abv-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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