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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
MKQRITVTVDSDSYQLLKAYDVNISGLVSTTMQNEARRLRAERWKVENQEGMVEVARFIE
MNGSFADENKDW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2h3c-a1-m1-cB 72 72 1.0000 1.0000 1.0000 5.82e-49 2h3c-a1-m1-cA_2h3c-a1-m1-cB
2 2h3c-a1-m1-cA 72 72 1.0000 1.0000 1.0000 5.82e-49 2h3c-a1-m1-cA_2h3c-a1-m1-cB
3 2h3a-a1-m1-cB 72 72 1.0000 1.0000 1.0000 5.82e-49 2h3a-a1-m1-cA_2h3a-a1-m1-cB
4 2h3a-a1-m1-cA 72 72 1.0000 1.0000 1.0000 5.82e-49 2h3a-a1-m1-cA_2h3a-a1-m1-cB
5 2adn-a1-m1-cB 72 72 1.0000 1.0000 1.0000 5.82e-49 2adn-a1-m1-cA_2adn-a1-m1-cB
6 2adn-a1-m1-cA 72 72 1.0000 1.0000 1.0000 5.82e-49 2adn-a1-m1-cA_2adn-a1-m1-cB
7 2adl-a1-m1-cB 72 72 1.0000 1.0000 1.0000 5.82e-49 2adl-a1-m1-cA_2adl-a1-m1-cB
8 2adl-a1-m1-cA 72 72 1.0000 1.0000 1.0000 5.82e-49 2adl-a1-m1-cA_2adl-a1-m1-cB
9 7boz-a1-m1-cq 131 43 0.1806 0.0992 0.3023 3.4 7boz-a1-m1-cr_7boz-a1-m1-cq
10 7umt-a1-m1-c3 270 34 0.1389 0.0370 0.2941 3.5 7umt-a1-m1-c2_7umt-a1-m1-c3
11 7umt-a1-m1-c2 270 34 0.1389 0.0370 0.2941 3.5 7umt-a1-m1-c2_7umt-a1-m1-c3
12 7ey9-a1-m1-cr 136 50 0.2222 0.1176 0.3200 3.6 7ey9-a1-m1-cr_7ey9-a1-m1-cp
13 7ey9-a1-m1-cp 141 50 0.2222 0.1135 0.3200 3.7 7ey9-a1-m1-cr_7ey9-a1-m1-cp
14 7ums-a1-m1-c3 486 34 0.1389 0.0206 0.2941 4.9 7ums-a1-m1-c3_7ums-a1-m1-c1, 7ums-a1-m1-c3_7ums-a1-m1-c2
15 7ums-a1-m1-c2 499 34 0.1389 0.0200 0.2941 5.0 7ums-a1-m1-c1_7ums-a1-m1-c2, 7ums-a1-m1-c3_7ums-a1-m1-c2
16 7ums-a1-m1-c1 499 34 0.1389 0.0200 0.2941 5.0 7ums-a1-m1-c1_7ums-a1-m1-c2, 7ums-a1-m1-c3_7ums-a1-m1-c1
17 2dlc-a1-m2-cX 339 34 0.1806 0.0383 0.3824 6.1 2dlc-a1-m1-cX_2dlc-a1-m2-cX
18 2dlc-a1-m1-cX 339 34 0.1806 0.0383 0.3824 6.1 2dlc-a1-m1-cX_2dlc-a1-m2-cX
19 5t3e-a3-m1-cB 430 27 0.1389 0.0233 0.3704 7.1 5t3e-a3-m1-cB_5t3e-a3-m1-cA
20 5t3e-a3-m1-cA 432 27 0.1389 0.0231 0.3704 7.1 5t3e-a3-m1-cB_5t3e-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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