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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
MKQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5b83-a2-m1-cF 59 59 1.0000 1.0000 1.0000 5.78e-37 5b83-a2-m1-cE_5b83-a2-m1-cF
2 5b83-a2-m1-cE 50 50 0.8475 1.0000 1.0000 9.67e-30 5b83-a2-m1-cE_5b83-a2-m1-cF
3 2v4h-a1-m2-cB 91 45 0.3898 0.2527 0.5111 1.68e-07 2v4h-a1-m2-cB_2v4h-a1-m1-cA, 2v4h-a1-m2-cB_2v4h-a1-m2-cA
4 2v4h-a1-m2-cA 98 45 0.3898 0.2347 0.5111 1.75e-07 2v4h-a1-m1-cA_2v4h-a1-m2-cA, 2v4h-a1-m2-cB_2v4h-a1-m2-cA
5 2v4h-a1-m1-cA 98 45 0.3898 0.2347 0.5111 1.75e-07 2v4h-a1-m1-cA_2v4h-a1-m2-cA, 2v4h-a1-m2-cB_2v4h-a1-m1-cA
6 4bwn-a1-m1-cB 86 28 0.2542 0.1744 0.5357 1.29e-05 4bwn-a1-m1-cA_4bwn-a1-m1-cB
7 4bwn-a1-m1-cA 86 28 0.2542 0.1744 0.5357 1.29e-05 4bwn-a1-m1-cA_4bwn-a1-m1-cB
8 7eb9-a1-m1-cB 54 37 0.2542 0.2778 0.4054 2.57e-04 7eb9-a1-m1-cB_7eb9-a1-m1-cC
9 7eb9-a1-m1-cC 60 37 0.2542 0.2500 0.4054 5.77e-04 7eb9-a1-m1-cB_7eb9-a1-m1-cC
10 5h07-a1-m1-cD 78 43 0.2712 0.2051 0.3721 0.58 5h07-a1-m1-cC_5h07-a1-m1-cD
11 5h07-a1-m1-cC 66 43 0.2712 0.2424 0.3721 0.62 5h07-a1-m1-cC_5h07-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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