Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
MKQVTAIIKPFKLDEVRESLAEVGVTGLTVTEVKGFGYVVDFLPKVKIEVVVDDKVVEQA
VDAIIKAARTGKIGDGKIFVQEVEQVIRIRTGETGPDAV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hwu-a3-m1-cA 99 99 1.0000 1.0000 1.0000 1.43e-63 1hwu-a3-m1-cA_1hwu-a3-m2-cD, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
2 1hwu-a3-m2-cD 99 99 0.9899 0.9899 0.9899 2.04e-62 1hwu-a3-m1-cA_1hwu-a3-m2-cD
3 1hwu-a3-m2-cF 91 99 0.9192 1.0000 0.9192 5.38e-54 1hwu-a3-m2-cE_1hwu-a3-m2-cF, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
4 1hwu-a3-m2-cE 84 92 0.8485 1.0000 0.9130 1.34e-48 1hwu-a3-m2-cE_1hwu-a3-m2-cF
5 2pii-a1-m3-cA 112 106 0.7071 0.6250 0.6604 5.04e-41 2pii-a1-m2-cA_2pii-a1-m3-cA
6 2pii-a1-m2-cA 112 106 0.7071 0.6250 0.6604 5.04e-41 2pii-a1-m2-cA_2pii-a1-m3-cA
7 3lf0-a1-m1-cC 101 100 0.6061 0.5941 0.6000 2.26e-40 3lf0-a1-m1-cC_3lf0-a1-m1-cB
8 2gw8-a1-m3-cA 99 99 0.6566 0.6566 0.6566 2.92e-40 2gw8-a1-m2-cA_2gw8-a1-m3-cA
9 2gw8-a1-m2-cA 99 99 0.6566 0.6566 0.6566 2.92e-40 2gw8-a1-m2-cA_2gw8-a1-m3-cA
10 5l9n-a1-m3-cA 92 93 0.6768 0.7283 0.7204 7.51e-40 5l9n-a1-m2-cA_5l9n-a1-m3-cA
11 5l9n-a1-m2-cA 92 93 0.6768 0.7283 0.7204 7.51e-40 5l9n-a1-m2-cA_5l9n-a1-m3-cA
12 4co2-a2-m3-cA 112 112 0.6768 0.5982 0.5982 9.57e-39 4co2-a2-m2-cA_4co2-a2-m3-cA
13 4co2-a2-m2-cA 112 112 0.6768 0.5982 0.5982 9.57e-39 4co2-a2-m2-cA_4co2-a2-m3-cA
14 3lf0-a1-m1-cB 112 111 0.6061 0.5357 0.5405 2.15e-38 3lf0-a1-m1-cC_3lf0-a1-m1-cB
15 3bzq-a1-m3-cA 99 99 0.5859 0.5859 0.5859 2.37e-38 3bzq-a1-m2-cA_3bzq-a1-m3-cA
16 3bzq-a1-m2-cA 99 99 0.5859 0.5859 0.5859 2.37e-38 3bzq-a1-m2-cA_3bzq-a1-m3-cA
17 4cnz-a1-m1-cB 100 100 0.6566 0.6500 0.6500 5.67e-38 4cnz-a1-m1-cA_4cnz-a1-m1-cB
18 4cnz-a1-m1-cA 100 100 0.6566 0.6500 0.6500 5.67e-38 4cnz-a1-m1-cA_4cnz-a1-m1-cB
19 2eg2-a2-m9-cA 95 99 0.6465 0.6737 0.6465 4.95e-37 2eg2-a2-m5-cA_2eg2-a2-m9-cA, 2eg2-a2-m6-cA_2eg2-a2-m9-cA
20 2eg2-a2-m6-cA 95 99 0.6465 0.6737 0.6465 4.95e-37 2eg2-a2-m6-cA_2eg2-a2-m9-cA
21 2eg2-a2-m5-cA 95 99 0.6465 0.6737 0.6465 4.95e-37 2eg2-a2-m5-cA_2eg2-a2-m9-cA
22 3n5b-a1-m3-cA 112 112 0.6364 0.5625 0.5625 7.62e-36 3n5b-a1-m2-cA_3n5b-a1-m3-cA
23 3n5b-a1-m2-cA 112 112 0.6364 0.5625 0.5625 7.62e-36 3n5b-a1-m2-cA_3n5b-a1-m3-cA
24 2nuu-a4-m2-cK 112 112 0.6364 0.5625 0.5625 8.05e-36 2nuu-a4-m1-cH_2nuu-a4-m2-cK
25 2nuu-a4-m1-cH 112 112 0.6364 0.5625 0.5625 8.05e-36 2nuu-a4-m1-cH_2nuu-a4-m2-cK
26 2xul-a1-m1-cA 106 105 0.5960 0.5566 0.5619 1.18e-35 2xul-a1-m1-cA_2xul-a1-m1-cC
27 2xul-a1-m1-cC 107 106 0.5960 0.5514 0.5566 1.74e-35 2xul-a1-m1-cA_2xul-a1-m1-cC
28 2gnk-a2-m3-cA 95 99 0.6162 0.6421 0.6162 2.22e-35 2gnk-a2-m2-cA_2gnk-a2-m3-cA
29 2gnk-a2-m2-cA 95 99 0.6162 0.6421 0.6162 2.22e-35 2gnk-a2-m2-cA_2gnk-a2-m3-cA
30 2ns1-a1-m3-cB 113 112 0.6263 0.5487 0.5536 4.01e-35 2ns1-a1-m2-cB_2ns1-a1-m3-cB
31 2ns1-a1-m2-cB 113 112 0.6263 0.5487 0.5536 4.01e-35 2ns1-a1-m2-cB_2ns1-a1-m3-cB
32 1ul3-a2-m3-cD 95 93 0.5556 0.5789 0.5914 2.80e-32 1ul3-a2-m2-cD_1ul3-a2-m3-cD
33 1ul3-a2-m2-cD 95 93 0.5556 0.5789 0.5914 2.80e-32 1ul3-a2-m2-cD_1ul3-a2-m3-cD
34 1ul3-a3-m5-cA 95 99 0.5556 0.5789 0.5556 5.53e-32 1ul3-a3-m1-cC_1ul3-a3-m5-cA, 1ul3-a3-m4-cB_1ul3-a3-m5-cA
35 1ul3-a3-m4-cB 94 99 0.5556 0.5851 0.5556 1.13e-31 1ul3-a3-m4-cB_1ul3-a3-m5-cA
36 1ul3-a3-m1-cC 94 99 0.5556 0.5851 0.5556 1.13e-31 1ul3-a3-m1-cC_1ul3-a3-m5-cA
37 4c3l-a1-m3-cA 89 93 0.5455 0.6067 0.5806 1.39e-31 4c3l-a1-m2-cA_4c3l-a1-m3-cA
38 4c3l-a1-m2-cA 89 93 0.5455 0.6067 0.5806 1.39e-31 4c3l-a1-m2-cA_4c3l-a1-m3-cA
39 7p4v-a1-m3-cA 113 112 0.5556 0.4867 0.4911 3.93e-31 7p4v-a1-m2-cA_7p4v-a1-m3-cA
40 7p4v-a1-m2-cA 113 112 0.5556 0.4867 0.4911 3.93e-31 7p4v-a1-m2-cA_7p4v-a1-m3-cA
41 7p50-a1-m1-cC 115 112 0.5354 0.4609 0.4732 5.48e-27 7p50-a1-m1-cB_7p50-a1-m1-cC
42 7p50-a1-m1-cB 115 112 0.5354 0.4609 0.4732 5.48e-27 7p50-a1-m1-cB_7p50-a1-m1-cC
43 3ncp-a6-m5-cD 99 99 0.5152 0.5152 0.5152 6.05e-27 3ncp-a6-m4-cD_3ncp-a6-m5-cD, 3ncp-a6-m5-cD_3ncp-a6-m4-cC
44 3ncp-a6-m4-cD 99 99 0.5152 0.5152 0.5152 6.05e-27 3ncp-a6-m4-cD_3ncp-a6-m5-cD
45 3ncp-a6-m4-cC 100 99 0.5152 0.5100 0.5152 6.80e-27 3ncp-a6-m5-cD_3ncp-a6-m4-cC
46 7p52-a1-m3-cA 111 111 0.5354 0.4775 0.4775 2.58e-26 7p52-a1-m2-cA_7p52-a1-m3-cA
47 7p52-a1-m2-cA 111 111 0.5354 0.4775 0.4775 2.58e-26 7p52-a1-m2-cA_7p52-a1-m3-cA
48 3t9z-a2-m1-cF 94 93 0.5051 0.5319 0.5376 2.03e-25 3t9z-a2-m1-cD_3t9z-a2-m1-cF
49 3t9z-a2-m1-cD 93 93 0.5051 0.5376 0.5376 2.80e-25 3t9z-a2-m1-cD_3t9z-a2-m1-cF
50 2o66-a2-m2-cA 107 96 0.4747 0.4393 0.4896 9.26e-25 2o66-a2-m2-cC_2o66-a2-m2-cA
51 2o66-a2-m1-cA 107 96 0.4747 0.4393 0.4896 9.26e-25 2o66-a2-m2-cC_2o66-a2-m1-cA
52 3ta2-a2-m5-cB 109 106 0.5253 0.4771 0.4906 2.12e-24 3ta2-a2-m4-cB_3ta2-a2-m5-cB
53 3ta2-a2-m4-cB 109 106 0.5253 0.4771 0.4906 2.12e-24 3ta2-a2-m4-cB_3ta2-a2-m5-cB
54 2o66-a2-m2-cC 106 96 0.4646 0.4340 0.4792 2.71e-24 2o66-a2-m2-cC_2o66-a2-m1-cA, 2o66-a2-m2-cC_2o66-a2-m2-cA
55 1ufl-a2-m2-cC 99 96 0.4747 0.4747 0.4896 4.56e-23 1ufl-a2-m2-cC_1ufl-a2-m1-cA
56 2rd5-a1-m3-cD 126 110 0.4848 0.3810 0.4364 9.83e-23 2rd5-a1-m2-cD_2rd5-a1-m3-cD
57 2rd5-a1-m2-cD 126 110 0.4848 0.3810 0.4364 9.83e-23 2rd5-a1-m2-cD_2rd5-a1-m3-cD
58 1v3r-a1-m1-cA 92 93 0.4646 0.5000 0.4946 1.69e-22 1v3r-a1-m1-cC_1v3r-a1-m1-cA
59 1v3r-a1-m1-cC 90 93 0.4646 0.5111 0.4946 2.73e-22 1v3r-a1-m1-cC_1v3r-a1-m1-cA
60 4ozn-a1-m1-cC 113 105 0.5657 0.4956 0.5333 1.33e-21 4ozn-a1-m1-cC_4ozn-a1-m1-cA
61 1ufl-a2-m1-cA 108 106 0.4747 0.4352 0.4434 2.86e-21 1ufl-a2-m2-cC_1ufl-a2-m1-cA
62 4ozn-a1-m1-cA 116 109 0.5657 0.4828 0.5138 5.70e-21 4ozn-a1-m1-cC_4ozn-a1-m1-cA
63 3l7p-a1-m1-cB 88 91 0.3939 0.4432 0.4286 1.35e-19 3l7p-a1-m1-cB_3l7p-a1-m1-cF
64 3l7p-a1-m1-cC 91 91 0.3939 0.4286 0.4286 4.30e-19 3l7p-a1-m1-cF_3l7p-a1-m1-cC
65 3l7p-a1-m1-cF 88 90 0.3838 0.4318 0.4222 1.02e-18 3l7p-a1-m1-cB_3l7p-a1-m1-cF, 3l7p-a1-m1-cF_3l7p-a1-m1-cC
66 7o4x-a1-m3-cA 103 100 0.3838 0.3689 0.3800 1.99e-18 7o4x-a1-m2-cA_7o4x-a1-m3-cA
67 7o4x-a1-m2-cA 103 100 0.3838 0.3689 0.3800 1.99e-18 7o4x-a1-m2-cA_7o4x-a1-m3-cA
68 4usj-a1-m3-cD 142 110 0.4545 0.3169 0.4091 2.25e-16 4usj-a1-m2-cD_4usj-a1-m3-cD
69 4usj-a1-m2-cD 142 110 0.4545 0.3169 0.4091 2.25e-16 4usj-a1-m2-cD_4usj-a1-m3-cD
70 4r25-a1-m3-cA 114 112 0.3838 0.3333 0.3393 3.72e-16 4r25-a1-m2-cA_4r25-a1-m3-cA
71 4r25-a1-m2-cA 114 112 0.3838 0.3333 0.3393 3.72e-16 4r25-a1-m2-cA_4r25-a1-m3-cA
72 4iv6-a1-m2-cA 382 43 0.1414 0.0366 0.3256 4.8 4iv6-a1-m2-cA_4iv6-a1-m2-cB
73 4iv6-a1-m1-cA 382 43 0.1414 0.0366 0.3256 4.8 4iv6-a1-m1-cA_4iv6-a1-m2-cB
74 4iv6-a1-m2-cB 383 43 0.1414 0.0366 0.3256 4.8 4iv6-a1-m1-cA_4iv6-a1-m2-cB, 4iv6-a1-m1-cB_4iv6-a1-m2-cB, 4iv6-a1-m2-cA_4iv6-a1-m2-cB
75 4iv6-a1-m1-cB 383 43 0.1414 0.0366 0.3256 4.8 4iv6-a1-m1-cB_4iv6-a1-m2-cB
76 8dh0-a1-m1-cJ 805 52 0.1616 0.0199 0.3077 6.1 8dh0-a1-m1-cJ_8dh0-a1-m1-cB
77 8dh0-a1-m1-cB 840 52 0.1616 0.0190 0.3077 6.7 8dh0-a1-m1-cF_8dh0-a1-m1-cB, 8dh0-a1-m1-cJ_8dh0-a1-m1-cB
78 6cxs-a2-m2-cA 598 55 0.1313 0.0217 0.2364 8.9 6cxs-a2-m2-cA_6cxs-a2-m2-cB
79 6cxs-a2-m2-cB 599 55 0.1313 0.0217 0.2364 9.0 6cxs-a2-m1-cB_6cxs-a2-m2-cB, 6cxs-a2-m2-cA_6cxs-a2-m2-cB
80 6cxs-a2-m1-cB 599 55 0.1313 0.0217 0.2364 9.0 6cxs-a2-m1-cB_6cxs-a2-m2-cB
81 4jkm-a1-m1-cB 602 55 0.1313 0.0216 0.2364 9.4 4jkm-a1-m1-cA_4jkm-a1-m1-cB
82 4jkm-a1-m1-cA 602 55 0.1313 0.0216 0.2364 9.4 4jkm-a1-m1-cA_4jkm-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600