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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
MKRTELDMYDDIFAVLERFPNVHNPHRVRIRRVGTKYFIEMDIEVDGKMSVKDAHELTVK
IRKEMLKRRDDIEDVTIHVEPLGNVE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vda-a1-m2-cA 86 86 1.0000 1.0000 1.0000 4.77e-58 6vda-a1-m1-cA_6vda-a1-m2-cA
2 6vda-a1-m1-cA 86 86 1.0000 1.0000 1.0000 4.77e-58 6vda-a1-m1-cA_6vda-a1-m2-cA
3 6qek-a1-m1-cB 77 76 0.2674 0.2987 0.3026 3.34e-08 6qek-a1-m1-cB_6qek-a1-m1-cA
4 6qek-a1-m1-cA 78 76 0.2674 0.2949 0.3026 3.89e-08 6qek-a1-m1-cB_6qek-a1-m1-cA
5 8f6i-a1-m1-cA 274 63 0.2442 0.0766 0.3333 2.81e-05 8f6i-a1-m1-cA_8f6i-a1-m1-cB
6 8f6i-a1-m1-cB 276 63 0.2442 0.0761 0.3333 2.81e-05 8f6i-a1-m1-cA_8f6i-a1-m1-cB
7 3h90-a1-m1-cC 283 71 0.2326 0.0707 0.2817 2.83e-05 3h90-a1-m1-cA_3h90-a1-m1-cC
8 3h90-a1-m1-cA 283 71 0.2326 0.0707 0.2817 2.83e-05 3h90-a1-m1-cA_3h90-a1-m1-cC
9 3j1z-a1-m9-cQ 296 63 0.2442 0.0709 0.3333 2.85e-05 3j1z-a1-m1-cP_3j1z-a1-m9-cQ, 3j1z-a1-m12-cP_3j1z-a1-m9-cQ, 3j1z-a1-m9-cP_3j1z-a1-m9-cQ
10 3j1z-a1-m9-cP 296 63 0.2442 0.0709 0.3333 2.85e-05 3j1z-a1-m14-cP_3j1z-a1-m9-cP, 3j1z-a1-m9-cP_3j1z-a1-m9-cQ
11 3j1z-a1-m14-cP 296 63 0.2442 0.0709 0.3333 2.85e-05 3j1z-a1-m14-cP_3j1z-a1-m9-cP
12 3j1z-a1-m12-cP 296 63 0.2442 0.0709 0.3333 2.85e-05 3j1z-a1-m12-cP_3j1z-a1-m9-cQ
13 3j1z-a1-m1-cP 296 63 0.2442 0.0709 0.3333 2.85e-05 3j1z-a1-m1-cP_3j1z-a1-m9-cQ
14 3byp-a1-m1-cB 82 58 0.2209 0.2317 0.3276 5.82e-05 3byp-a1-m1-cA_3byp-a1-m1-cB
15 3byp-a1-m1-cA 82 58 0.2209 0.2317 0.3276 5.82e-05 3byp-a1-m1-cA_3byp-a1-m1-cB
16 3byr-a1-m2-cA 89 59 0.2209 0.2135 0.3220 8.94e-05 3byr-a1-m1-cA_3byr-a1-m2-cA
17 3byr-a1-m1-cA 89 59 0.2209 0.2135 0.3220 8.94e-05 3byr-a1-m1-cA_3byr-a1-m2-cA
18 8f6k-a1-m1-cC 279 63 0.2326 0.0717 0.3175 0.001 8f6k-a1-m1-cC_8f6k-a1-m1-cD
19 8f6k-a1-m1-cA 279 63 0.2326 0.0717 0.3175 0.001 8f6k-a1-m1-cA_8f6k-a1-m1-cD
20 8f6k-a1-m1-cD 287 63 0.2326 0.0697 0.3175 0.001 8f6k-a1-m1-cA_8f6k-a1-m1-cD, 8f6k-a1-m1-cB_8f6k-a1-m1-cD, 8f6k-a1-m1-cC_8f6k-a1-m1-cD
21 8f6k-a1-m1-cB 287 63 0.2326 0.0697 0.3175 0.001 8f6k-a1-m1-cB_8f6k-a1-m1-cD
22 6otv-a2-m2-cB 350 18 0.1279 0.0314 0.6111 2.4 6otv-a2-m1-cA_6otv-a2-m2-cB
23 6otv-a2-m1-cA 350 18 0.1279 0.0314 0.6111 2.4 6otv-a2-m1-cA_6otv-a2-m2-cB
24 6otv-a1-m1-cB 350 18 0.1279 0.0314 0.6111 2.4 6otv-a1-m1-cA_6otv-a1-m1-cB
25 6otv-a1-m1-cA 350 18 0.1279 0.0314 0.6111 2.4 6otv-a1-m1-cA_6otv-a1-m1-cB
26 7adr-a1-m1-cB 465 71 0.2093 0.0387 0.2535 6.8 7adr-a1-m1-cB_7adr-a1-m1-cE
27 7adr-a1-m1-cE 466 71 0.2093 0.0386 0.2535 7.1 7adr-a1-m1-cB_7adr-a1-m1-cE
28 7k47-a1-m3-cA 455 36 0.1395 0.0264 0.3333 9.9 7k47-a1-m2-cA_7k47-a1-m3-cA
29 7k47-a1-m2-cA 455 36 0.1395 0.0264 0.3333 9.9 7k47-a1-m2-cA_7k47-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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