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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2k1n-a1-m1-cD 55 55 1.0000 1.0000 1.0000 2.91e-34 2k1n-a1-m1-cA_2k1n-a1-m1-cD
2 2k1n-a1-m1-cB 55 55 1.0000 1.0000 1.0000 2.91e-34 2k1n-a1-m1-cA_2k1n-a1-m1-cB
3 2k1n-a1-m1-cA 55 55 1.0000 1.0000 1.0000 2.91e-34 2k1n-a1-m1-cA_2k1n-a1-m1-cB, 2k1n-a1-m1-cA_2k1n-a1-m1-cD
4 2ro4-a1-m1-cB 53 53 0.9636 1.0000 1.0000 5.90e-32 2ro4-a1-m1-cA_2ro4-a1-m1-cB
5 2ro4-a1-m1-cA 53 53 0.9636 1.0000 1.0000 5.90e-32 2ro4-a1-m1-cA_2ro4-a1-m1-cB
6 1ysf-a1-m1-cB 52 51 0.9273 0.9808 1.0000 2.61e-30 1ysf-a1-m1-cA_1ysf-a1-m1-cB
7 1ysf-a1-m1-cA 52 51 0.9273 0.9808 1.0000 2.61e-30 1ysf-a1-m1-cA_1ysf-a1-m1-cB
8 2ro3-a1-m1-cB 54 54 0.6909 0.7037 0.7037 2.90e-22 2ro3-a1-m1-cA_2ro3-a1-m1-cB
9 2ro3-a1-m1-cA 54 54 0.6909 0.7037 0.7037 2.90e-22 2ro3-a1-m1-cA_2ro3-a1-m1-cB
10 2w1t-a1-m1-cA 175 49 0.6000 0.1886 0.6735 6.70e-15 2w1t-a1-m1-cB_2w1t-a1-m1-cA
11 2w1t-a1-m1-cB 173 47 0.5818 0.1850 0.6809 3.93e-14 2w1t-a1-m1-cB_2w1t-a1-m1-cA
12 2zcx-a1-m2-cA 205 30 0.2364 0.0634 0.4333 1.2 2zcx-a1-m1-cA_2zcx-a1-m2-cA
13 2zcx-a1-m1-cA 205 30 0.2364 0.0634 0.4333 1.2 2zcx-a1-m1-cA_2zcx-a1-m2-cA
14 7ovp-a1-m1-cB 329 28 0.2364 0.0395 0.4643 1.6 7ovp-a1-m1-cA_7ovp-a1-m1-cB
15 7ovp-a1-m1-cA 329 28 0.2364 0.0395 0.4643 1.6 7ovp-a1-m1-cA_7ovp-a1-m1-cB
16 6trr-a1-m2-cA 140 34 0.2182 0.0857 0.3529 9.0 6trr-a1-m1-cA_6trr-a1-m2-cA
17 6trr-a1-m1-cA 140 34 0.2182 0.0857 0.3529 9.0 6trr-a1-m1-cA_6trr-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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