Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
MKTAISLPDETFDRVSRRASELGMSRSEFFTKAAQRYLHELDAQLLTGQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7wnr-a1-m1-cC 49 49 1.0000 1.0000 1.0000 8.33e-31 7wnr-a1-m1-cB_7wnr-a1-m1-cC
2 7wnr-a1-m1-cB 49 49 1.0000 1.0000 1.0000 8.33e-31 7wnr-a1-m1-cB_7wnr-a1-m1-cC
3 2mdv-a1-m1-cB 38 34 0.2449 0.3158 0.3529 0.14 2mdv-a1-m1-cA_2mdv-a1-m1-cB
4 2mdv-a1-m1-cA 38 34 0.2449 0.3158 0.3529 0.14 2mdv-a1-m1-cA_2mdv-a1-m1-cB
5 3ft7-a1-m1-cB 46 42 0.2449 0.2609 0.2857 1.3 3ft7-a1-m1-cA_3ft7-a1-m1-cB
6 3ft7-a1-m1-cA 45 42 0.2449 0.2667 0.2857 1.3 3ft7-a1-m1-cA_3ft7-a1-m1-cB
7 3l2k-a1-m1-cB 352 41 0.2653 0.0369 0.3171 4.9 3l2k-a1-m1-cA_3l2k-a1-m1-cB
8 3l2k-a1-m1-cA 352 41 0.2653 0.0369 0.3171 4.9 3l2k-a1-m1-cA_3l2k-a1-m1-cB
9 3h87-a1-m2-cD 66 26 0.1633 0.1212 0.3077 6.5 3h87-a1-m2-cD_3h87-a1-m1-cC
10 1yq1-a2-m2-cB 198 29 0.2449 0.0606 0.4138 6.9 1yq1-a2-m1-cA_1yq1-a2-m2-cB, 1yq1-a2-m2-cA_1yq1-a2-m2-cB
11 1yq1-a2-m2-cA 198 29 0.2449 0.0606 0.4138 6.9 1yq1-a2-m2-cA_1yq1-a2-m2-cB
12 1yq1-a2-m1-cA 198 29 0.2449 0.0606 0.4138 6.9 1yq1-a2-m1-cA_1yq1-a2-m2-cB
13 3h87-a1-m1-cC 72 26 0.1633 0.1111 0.3077 7.0 3h87-a1-m2-cD_3h87-a1-m1-cC
14 3ta6-a1-m1-cA 255 14 0.1837 0.0353 0.6429 7.7 3ta6-a1-m1-cA_3ta6-a1-m1-cB
15 3ta6-a1-m1-cB 256 14 0.1837 0.0352 0.6429 7.7 3ta6-a1-m1-cA_3ta6-a1-m1-cB
16 5x3t-a1-m1-cG 59 29 0.2245 0.1864 0.3793 8.3 5x3t-a1-m1-cE_5x3t-a1-m1-cG
17 5x3t-a1-m1-cE 59 29 0.2245 0.1864 0.3793 8.3 5x3t-a1-m1-cE_5x3t-a1-m1-cC, 5x3t-a1-m1-cE_5x3t-a1-m1-cG
18 5n72-a1-m2-cA 387 34 0.2245 0.0284 0.3235 8.9 5n72-a1-m1-cA_5n72-a1-m2-cA
19 5n72-a1-m1-cA 387 34 0.2245 0.0284 0.3235 8.9 5n72-a1-m1-cA_5n72-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600