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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
MKTLMVFDPAMDQALVDFSTDVQWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEASGAE
GLPLLLLDGETVMAGRYPKRAELARWFGIPLDKVGLAP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kgk-a1-m1-cB 98 98 1.0000 1.0000 1.0000 2.24e-68 3kgk-a1-m1-cA_3kgk-a1-m1-cB
2 3kgk-a1-m1-cA 92 94 0.9388 1.0000 0.9787 1.01e-61 3kgk-a1-m1-cA_3kgk-a1-m1-cB
3 3ktb-a1-m1-cA 102 100 0.3163 0.3039 0.3100 2.99e-13 3ktb-a1-m4-cC_3ktb-a1-m1-cA
4 3ktb-a2-m1-cD 100 100 0.3163 0.3100 0.3100 3.01e-13 3ktb-a2-m1-cB_3ktb-a2-m1-cD, 3ktb-a2-m1-cC_3ktb-a2-m1-cD
5 3ktb-a2-m1-cC 100 100 0.3163 0.3100 0.3100 3.01e-13 3ktb-a2-m1-cC_3ktb-a2-m1-cD
6 3ktb-a1-m4-cD 100 100 0.3163 0.3100 0.3100 3.01e-13 3ktb-a1-m2-cD_3ktb-a1-m4-cD
7 3ktb-a1-m4-cC 100 100 0.3163 0.3100 0.3100 3.01e-13 3ktb-a1-m4-cC_3ktb-a1-m1-cA
8 3ktb-a1-m2-cD 100 100 0.3163 0.3100 0.3100 3.01e-13 3ktb-a1-m2-cD_3ktb-a1-m4-cD
9 3ktb-a2-m1-cB 98 99 0.3061 0.3061 0.3030 2.33e-12 3ktb-a2-m1-cB_3ktb-a2-m1-cD
10 6b9v-a1-m1-cB 253 61 0.1837 0.0711 0.2951 0.48 6b9v-a1-m1-cB_6b9v-a1-m1-cA
11 5ue1-a1-m1-cB 233 86 0.2347 0.0987 0.2674 0.75 5ue1-a1-m1-cA_5ue1-a1-m1-cB
12 5ue1-a1-m1-cA 233 86 0.2347 0.0987 0.2674 0.75 5ue1-a1-m1-cA_5ue1-a1-m1-cB
13 1igw-a1-m1-cA 396 52 0.1224 0.0303 0.2308 0.80 1igw-a1-m1-cA_1igw-a1-m1-cD
14 1e19-a1-m1-cB 313 36 0.1429 0.0447 0.3889 0.99 1e19-a1-m1-cA_1e19-a1-m1-cB
15 1e19-a1-m1-cA 313 36 0.1429 0.0447 0.3889 0.99 1e19-a1-m1-cA_1e19-a1-m1-cB
16 2xf4-a1-m2-cA 210 44 0.1531 0.0714 0.3409 1.2 2xf4-a1-m1-cA_2xf4-a1-m2-cA
17 2xf4-a1-m1-cA 210 44 0.1531 0.0714 0.3409 1.2 2xf4-a1-m1-cA_2xf4-a1-m2-cA
18 1vlv-a1-m9-cA 308 94 0.2551 0.0812 0.2660 1.9 1vlv-a1-m11-cA_1vlv-a1-m9-cA, 1vlv-a1-m5-cA_1vlv-a1-m9-cA, 1vlv-a1-m6-cA_1vlv-a1-m9-cA
19 1vlv-a1-m6-cA 308 94 0.2551 0.0812 0.2660 1.9 1vlv-a1-m6-cA_1vlv-a1-m9-cA
20 1vlv-a1-m5-cA 308 94 0.2551 0.0812 0.2660 1.9 1vlv-a1-m5-cA_1vlv-a1-m9-cA
21 1vlv-a1-m11-cA 308 94 0.2551 0.0812 0.2660 1.9 1vlv-a1-m11-cA_1vlv-a1-m9-cA
22 4mf5-a1-m2-cA 238 79 0.2347 0.0966 0.2911 2.1 4mf5-a1-m1-cA_4mf5-a1-m2-cA
23 4mf5-a1-m1-cA 238 79 0.2347 0.0966 0.2911 2.1 4mf5-a1-m1-cA_4mf5-a1-m2-cA
24 6b9v-a1-m1-cA 254 53 0.1735 0.0669 0.3208 9.0 6b9v-a1-m1-cB_6b9v-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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