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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPE
RARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQTR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2h9d-a4-m1-cC 98 98 1.0000 1.0000 1.0000 1.15e-68 2h9d-a4-m1-cC_2h9d-a4-m1-cD
2 2h9d-a3-m1-cC 98 98 1.0000 1.0000 1.0000 1.15e-68 2h9d-a3-m1-cA_2h9d-a3-m1-cC, 2h9d-a3-m1-cB_2h9d-a3-m1-cC
3 2h9d-a4-m1-cD 100 98 1.0000 0.9800 1.0000 1.63e-68 2h9d-a4-m1-cC_2h9d-a4-m1-cD, 2h9d-a4-m2-cA_2h9d-a4-m1-cD
4 2h9d-a3-m1-cD 100 98 1.0000 0.9800 1.0000 1.63e-68 2h9d-a3-m1-cA_2h9d-a3-m1-cD, 2h9d-a3-m1-cB_2h9d-a3-m1-cD
5 2h9d-a4-m2-cB 87 93 0.8878 1.0000 0.9355 5.05e-58 2h9d-a4-m2-cA_2h9d-a4-m2-cB
6 2h9d-a3-m1-cB 87 93 0.8878 1.0000 0.9355 5.05e-58 2h9d-a3-m1-cB_2h9d-a3-m1-cC, 2h9d-a3-m1-cB_2h9d-a3-m1-cD
7 2h9d-a4-m2-cA 84 94 0.8571 1.0000 0.8936 3.73e-55 2h9d-a4-m2-cA_2h9d-a4-m1-cD, 2h9d-a4-m2-cA_2h9d-a4-m2-cB
8 2h9d-a3-m1-cA 84 94 0.8571 1.0000 0.8936 3.73e-55 2h9d-a3-m1-cA_2h9d-a3-m1-cC, 2h9d-a3-m1-cA_2h9d-a3-m1-cD
9 4yeh-a1-m1-cB 224 44 0.1429 0.0625 0.3182 0.85 4yeh-a1-m1-cA_4yeh-a1-m1-cB
10 4yeh-a1-m1-cA 224 44 0.1429 0.0625 0.3182 0.85 4yeh-a1-m1-cA_4yeh-a1-m1-cB
11 7rj1-a2-m1-cC 263 46 0.1531 0.0570 0.3261 1.0 7rj1-a2-m2-cD_7rj1-a2-m1-cC
12 7rj1-a2-m2-cD 261 46 0.1531 0.0575 0.3261 1.0 7rj1-a2-m2-cD_7rj1-a2-m1-cC
13 6q8f-a1-m1-cB 184 32 0.1020 0.0543 0.3125 4.4 6q8f-a1-m1-cB_6q8f-a1-m2-cA
14 5en6-a1-m2-cA 175 31 0.1020 0.0571 0.3226 4.5 5en6-a1-m1-cA_5en6-a1-m2-cA
15 5en6-a1-m1-cA 175 31 0.1020 0.0571 0.3226 4.5 5en6-a1-m1-cA_5en6-a1-m2-cA
16 6q8i-a2-m1-cE 186 31 0.1020 0.0538 0.3226 5.3 6q8i-a2-m1-cF_6q8i-a2-m1-cE
17 6q8f-a1-m2-cA 197 31 0.1020 0.0508 0.3226 5.6 6q8f-a1-m1-cB_6q8f-a1-m2-cA
18 6q8j-a1-m2-cA 188 31 0.1020 0.0532 0.3226 5.6 6q8j-a1-m1-cA_6q8j-a1-m2-cA
19 6q8j-a1-m1-cA 188 31 0.1020 0.0532 0.3226 5.6 6q8j-a1-m1-cA_6q8j-a1-m2-cA
20 4iqj-a1-m1-cA 1164 28 0.1327 0.0112 0.4643 7.0 4iqj-a1-m1-cA_4iqj-a1-m1-cB, 4iqj-a1-m1-cA_4iqj-a1-m1-cD
21 2hpi-a2-m2-cA 1143 28 0.1327 0.0114 0.4643 7.2 2hpi-a2-m1-cA_2hpi-a2-m2-cA
22 2hpi-a2-m1-cA 1143 28 0.1327 0.0114 0.4643 7.2 2hpi-a2-m1-cA_2hpi-a2-m2-cA
23 5en8-a1-m1-cB 173 28 0.0918 0.0520 0.3214 7.2 5en8-a1-m1-cA_5en8-a1-m1-cB
24 4iqj-a1-m1-cC 1166 28 0.1327 0.0111 0.4643 7.3 4iqj-a1-m1-cC_4iqj-a1-m1-cB
25 4iqj-a1-m1-cB 1167 28 0.1327 0.0111 0.4643 7.3 4iqj-a1-m1-cA_4iqj-a1-m1-cB, 4iqj-a1-m1-cC_4iqj-a1-m1-cB
26 5en8-a1-m1-cA 172 28 0.0918 0.0523 0.3214 7.5 5en8-a1-m1-cA_5en8-a1-m1-cB
27 4iqj-a1-m1-cD 1185 28 0.1327 0.0110 0.4643 7.6 4iqj-a1-m1-cA_4iqj-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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