Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQLAIEATPANLKALEAQKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hvf-a2-m2-cA 51 51 1.0000 1.0000 1.0000 1.72e-30 2hvf-a2-m1-cA_2hvf-a2-m2-cA
2 2hvf-a2-m1-cA 51 51 1.0000 1.0000 1.0000 1.72e-30 2hvf-a2-m1-cA_2hvf-a2-m2-cA
3 1div-a1-m2-cA 149 52 1.0000 0.3423 0.9808 2.04e-28 1div-a1-m1-cA_1div-a1-m2-cA
4 1div-a1-m1-cA 149 52 1.0000 0.3423 0.9808 2.04e-28 1div-a1-m1-cA_1div-a1-m2-cA
5 2hba-a3-m4-cA 52 52 0.9804 0.9615 0.9615 9.16e-28 2hba-a3-m1-cB_2hba-a3-m4-cA, 2hba-a3-m3-cA_2hba-a3-m4-cA
6 2hba-a3-m3-cA 52 52 0.9804 0.9615 0.9615 9.16e-28 2hba-a3-m3-cA_2hba-a3-m4-cA
7 2hba-a3-m1-cB 52 52 0.9804 0.9615 0.9615 9.16e-28 2hba-a3-m1-cB_2hba-a3-m4-cA
8 3kky-a1-m1-cB 204 35 0.2549 0.0637 0.3714 1.3 3kky-a1-m1-cA_3kky-a1-m1-cB
9 3kky-a1-m1-cA 203 35 0.2549 0.0640 0.3714 1.3 3kky-a1-m1-cA_3kky-a1-m1-cB
10 1o7x-a2-m1-cD 365 38 0.2157 0.0301 0.2895 5.5 1o7x-a2-m1-cD_1o7x-a2-m1-cC
11 1o7x-a2-m1-cC 370 38 0.2157 0.0297 0.2895 5.5 1o7x-a2-m1-cD_1o7x-a2-m1-cC
12 3qw4-a3-m2-cB 445 31 0.2745 0.0315 0.4516 7.3 3qw4-a3-m2-cB_3qw4-a3-m1-cC
13 3qw4-a2-m1-cB 445 31 0.2745 0.0315 0.4516 7.3 3qw4-a2-m1-cB_3qw4-a2-m1-cC
14 3qw4-a3-m1-cC 447 31 0.2745 0.0313 0.4516 8.0 3qw4-a3-m2-cB_3qw4-a3-m1-cC
15 3qw4-a2-m1-cC 447 31 0.2745 0.0313 0.4516 8.0 3qw4-a2-m1-cB_3qw4-a2-m1-cC
16 3qw4-a1-m2-cC 447 31 0.2745 0.0313 0.4516 8.0 3qw4-a1-m1-cC_3qw4-a1-m2-cC
17 3qw4-a1-m1-cC 447 31 0.2745 0.0313 0.4516 8.0 3qw4-a1-m1-cC_3qw4-a1-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600