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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
MKVIFLKDVKGMGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hba-a3-m4-cA 52 52 1.0000 1.0000 1.0000 1.38e-31 2hba-a3-m1-cB_2hba-a3-m4-cA, 2hba-a3-m3-cA_2hba-a3-m4-cA
2 2hba-a3-m3-cA 52 52 1.0000 1.0000 1.0000 1.38e-31 2hba-a3-m3-cA_2hba-a3-m4-cA
3 2hba-a3-m1-cB 52 52 1.0000 1.0000 1.0000 1.38e-31 2hba-a3-m1-cB_2hba-a3-m4-cA
4 1div-a1-m2-cA 149 52 0.9808 0.3423 0.9808 2.56e-30 1div-a1-m1-cA_1div-a1-m2-cA
5 1div-a1-m1-cA 149 52 0.9808 0.3423 0.9808 2.56e-30 1div-a1-m1-cA_1div-a1-m2-cA
6 2hvf-a2-m2-cA 51 52 0.9615 0.9804 0.9615 9.34e-28 2hvf-a2-m1-cA_2hvf-a2-m2-cA
7 2hvf-a2-m1-cA 51 52 0.9615 0.9804 0.9615 9.34e-28 2hvf-a2-m1-cA_2hvf-a2-m2-cA
8 3kky-a1-m1-cB 204 20 0.1923 0.0490 0.5000 5.9 3kky-a1-m1-cA_3kky-a1-m1-cB
9 3kky-a1-m1-cA 203 20 0.1923 0.0493 0.5000 6.1 3kky-a1-m1-cA_3kky-a1-m1-cB
10 1en4-a2-m1-cD 205 22 0.2115 0.0537 0.5000 8.8 1en4-a2-m1-cC_1en4-a2-m1-cD
11 1en4-a2-m1-cC 205 22 0.2115 0.0537 0.5000 8.8 1en4-a2-m1-cC_1en4-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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