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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7lwr-a4-m1-cG 54 54 1.0000 1.0000 1.0000 3.70e-36 7lwr-a4-m1-cD_7lwr-a4-m1-cG
2 7lwr-a4-m1-cD 54 54 1.0000 1.0000 1.0000 3.70e-36 7lwr-a4-m1-cD_7lwr-a4-m1-cG
3 7lxs-a4-m2-cG 55 54 0.6667 0.6545 0.6667 4.18e-22 7lxs-a4-m1-cF_7lxs-a4-m2-cG
4 7lxs-a4-m1-cF 55 54 0.6667 0.6545 0.6667 4.18e-22 7lxs-a4-m1-cF_7lxs-a4-m2-cG
5 6b2q-a2-m1-cB 266 41 0.2778 0.0564 0.3659 0.71 6b2q-a2-m1-cC_6b2q-a2-m1-cB
6 6b2q-a2-m1-cC 264 41 0.2778 0.0568 0.3659 0.78 6b2q-a2-m1-cC_6b2q-a2-m1-cB
7 4ow8-a1-m2-cA 276 41 0.2778 0.0543 0.3659 0.80 4ow8-a1-m1-cA_4ow8-a1-m2-cA
8 4ow8-a1-m1-cA 276 41 0.2778 0.0543 0.3659 0.80 4ow8-a1-m1-cA_4ow8-a1-m2-cA
9 4ani-a1-m1-cH 501 28 0.2037 0.0220 0.3929 1.5 4ani-a1-m1-cH_4ani-a1-m1-cC, 4ani-a1-m1-cH_4ani-a1-m1-cD, 4ani-a1-m1-cH_4ani-a1-m1-cG
10 4ani-a1-m1-cD 509 28 0.2037 0.0216 0.3929 1.5 4ani-a1-m1-cH_4ani-a1-m1-cD
11 4ani-a1-m1-cC 509 28 0.2037 0.0216 0.3929 1.5 4ani-a1-m1-cG_4ani-a1-m1-cC, 4ani-a1-m1-cH_4ani-a1-m1-cC
12 4ani-a1-m1-cG 502 28 0.2037 0.0219 0.3929 1.5 4ani-a1-m1-cG_4ani-a1-m1-cC, 4ani-a1-m1-cH_4ani-a1-m1-cG
13 1elu-a1-m1-cB 381 15 0.1852 0.0262 0.6667 1.6 1elu-a1-m1-cA_1elu-a1-m1-cB
14 1elu-a1-m1-cA 381 15 0.1852 0.0262 0.6667 1.6 1elu-a1-m1-cA_1elu-a1-m1-cB
15 1kqf-a1-m3-cA 982 35 0.2407 0.0132 0.3714 3.4 1kqf-a1-m2-cA_1kqf-a1-m3-cA
16 1kqf-a1-m2-cA 982 35 0.2407 0.0132 0.3714 3.4 1kqf-a1-m2-cA_1kqf-a1-m3-cA
17 3ty1-a1-m1-cC 379 38 0.2407 0.0343 0.3421 3.6 3ty1-a1-m1-cB_3ty1-a1-m1-cC
18 3ty1-a1-m1-cB 379 38 0.2407 0.0343 0.3421 3.6 3ty1-a1-m1-cB_3ty1-a1-m1-cC
19 4cic-a1-m1-cA 138 21 0.1481 0.0580 0.3810 6.3 4cic-a1-m1-cB_4cic-a1-m1-cA
20 6jpv-a1-m2-cB 152 28 0.1852 0.0658 0.3571 6.3 6jpv-a1-m2-cB_6jpv-a1-m1-cA
21 6k39-a1-m1-cA 151 28 0.1852 0.0662 0.3571 6.8 6k39-a1-m1-cA_6k39-a1-m1-cB
22 6k39-a1-m1-cB 152 28 0.1852 0.0658 0.3571 6.8 6k39-a1-m1-cA_6k39-a1-m1-cB
23 4cic-a1-m1-cB 137 21 0.1481 0.0584 0.3810 6.9 4cic-a1-m1-cB_4cic-a1-m1-cA
24 6jpv-a1-m1-cA 153 28 0.1852 0.0654 0.3571 6.9 6jpv-a1-m2-cB_6jpv-a1-m1-cA
25 4w4r-a1-m1-cA 270 36 0.2222 0.0444 0.3333 8.9 4w4r-a1-m1-cA_4w4r-a1-m1-cB
26 4po2-a3-m2-cA 228 28 0.1852 0.0439 0.3571 9.0 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
27 4po2-a3-m1-cA 228 28 0.1852 0.0439 0.3571 9.0 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m1-cA
28 4po2-a3-m2-cB 215 28 0.1852 0.0465 0.3571 9.1 4po2-a3-m1-cB_4po2-a3-m2-cB, 4po2-a3-m2-cB_4po2-a3-m1-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
29 4po2-a3-m1-cB 215 28 0.1852 0.0465 0.3571 9.1 4po2-a3-m1-cB_4po2-a3-m2-cB
30 4w4r-a1-m1-cB 276 36 0.2222 0.0435 0.3333 9.8 4w4r-a1-m1-cA_4w4r-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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