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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
MLEGDLVSKMLRAVLQSHKNGVALPRLQGEYRSLTGDWIPFKQLGFPTLEAYLRSVPAVV
RIETSRSGEITCYAMA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3rco-a1-m16-cA 76 76 1.0000 1.0000 1.0000 8.58e-53 3rco-a1-m16-cA_3rco-a1-m9-cB
2 3rco-a4-m9-cB 78 76 1.0000 0.9744 1.0000 1.47e-52 3rco-a4-m5-cB_3rco-a4-m9-cB
3 3rco-a4-m5-cB 78 76 1.0000 0.9744 1.0000 1.47e-52 3rco-a4-m5-cB_3rco-a4-m9-cB
4 3rco-a2-m9-cB 78 76 1.0000 0.9744 1.0000 1.47e-52 3rco-a2-m12-cB_3rco-a2-m9-cB
5 3rco-a2-m12-cB 78 76 1.0000 0.9744 1.0000 1.47e-52 3rco-a2-m12-cB_3rco-a2-m9-cB
6 3rco-a1-m9-cB 78 76 1.0000 0.9744 1.0000 1.47e-52 3rco-a1-m16-cA_3rco-a1-m9-cB
7 3s51-a7-m1-cD 1034 28 0.1184 0.0087 0.3214 5.7 3s51-a7-m1-cD_3s51-a7-m1-cA, 3s51-a7-m1-cD_3s51-a7-m1-cB, 3s51-a7-m1-cD_3s51-a7-m1-cC
8 3s51-a7-m1-cB 1071 28 0.1184 0.0084 0.3214 5.7 3s51-a7-m1-cD_3s51-a7-m1-cB
9 3s51-a7-m1-cC 1134 28 0.1184 0.0079 0.3214 5.7 3s51-a7-m1-cD_3s51-a7-m1-cC
10 3s51-a7-m1-cA 1134 28 0.1184 0.0079 0.3214 5.7 3s51-a7-m1-cD_3s51-a7-m1-cA
11 8b4a-a1-m1-cA 304 36 0.1842 0.0461 0.3889 9.2 8b4a-a1-m1-cB_8b4a-a1-m1-cA
12 8b4a-a1-m1-cB 301 36 0.1842 0.0465 0.3889 9.2 8b4a-a1-m1-cB_8b4a-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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