Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=66)
MLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQKVRFEIVEGNRGPQA
ANVTKE

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2i5m-a2-m2-cX 66 66 1.0000 1.0000 1.0000 2.65e-42 2i5m-a2-m1-cX_2i5m-a2-m2-cX
2 2i5m-a2-m1-cX 66 66 1.0000 1.0000 1.0000 2.65e-42 2i5m-a2-m1-cX_2i5m-a2-m2-cX
3 1hzb-a1-m1-cB 66 66 0.8333 0.8333 0.8333 1.45e-34 1hzb-a1-m1-cA_1hzb-a1-m1-cB
4 1hzb-a1-m1-cA 66 66 0.8333 0.8333 0.8333 1.45e-34 1hzb-a1-m1-cA_1hzb-a1-m1-cB
5 2hax-a1-m1-cB 66 65 0.8182 0.8182 0.8308 5.00e-34 2hax-a1-m1-cA_2hax-a1-m1-cB
6 2hax-a1-m1-cA 66 65 0.8182 0.8182 0.8308 5.00e-34 2hax-a1-m1-cA_2hax-a1-m1-cB
7 1c9o-a1-m1-cB 66 65 0.8182 0.8182 0.8308 5.00e-34 1c9o-a1-m1-cA_1c9o-a1-m1-cB
8 1c9o-a1-m1-cA 66 65 0.8182 0.8182 0.8308 5.00e-34 1c9o-a1-m1-cA_1c9o-a1-m1-cB
9 5jx4-a1-m1-cA 65 65 0.7879 0.8000 0.8000 1.02e-30 5jx4-a1-m1-cA_5jx4-a1-m1-cB
10 5jx4-a1-m1-cB 66 65 0.7879 0.7879 0.8000 1.11e-30 5jx4-a1-m1-cA_5jx4-a1-m1-cB
11 3i2z-a1-m1-cA 71 64 0.6667 0.6197 0.6875 4.32e-25 3i2z-a1-m1-cB_3i2z-a1-m1-cA
12 3i2z-a1-m1-cB 67 64 0.6667 0.6567 0.6875 5.76e-25 3i2z-a1-m1-cB_3i2z-a1-m1-cA
13 3cam-a1-m1-cB 65 61 0.5758 0.5846 0.6230 3.23e-19 3cam-a1-m1-cA_3cam-a1-m1-cB
14 3cam-a1-m1-cA 65 61 0.5758 0.5846 0.6230 3.23e-19 3cam-a1-m1-cA_3cam-a1-m1-cB
15 7f3i-a1-m1-cA 93 66 0.4242 0.3011 0.4242 3.36e-11 7f3i-a1-m1-cE_7f3i-a1-m1-cA
16 7f3i-a1-m1-cE 91 66 0.4242 0.3077 0.4242 3.54e-11 7f3i-a1-m1-cE_7f3i-a1-m1-cA
17 4alp-a1-m4-cD 84 70 0.4091 0.3214 0.3857 3.50e-10 4alp-a1-m4-cD_4alp-a1-m2-cB
18 4alp-a1-m2-cB 86 70 0.4091 0.3140 0.3857 3.83e-10 4alp-a1-m4-cD_4alp-a1-m2-cB
19 3ulj-a3-m2-cA 87 70 0.4091 0.3103 0.3857 4.32e-10 3ulj-a3-m2-cA_3ulj-a3-m2-cB
20 3ulj-a3-m1-cA 87 70 0.4091 0.3103 0.3857 4.32e-10 3ulj-a3-m1-cA_3ulj-a3-m2-cB
21 3ulj-a3-m2-cB 89 70 0.4091 0.3034 0.3857 1.53e-08 3ulj-a3-m1-cA_3ulj-a3-m2-cB, 3ulj-a3-m2-cA_3ulj-a3-m2-cB
22 2bh8-a1-m2-cA 85 32 0.3182 0.2471 0.6562 1.34e-07 2bh8-a1-m2-cA_2bh8-a1-m2-cB
23 2bh8-a1-m1-cA 85 32 0.3182 0.2471 0.6562 1.34e-07 2bh8-a1-m1-cA_2bh8-a1-m2-cB
24 2bh8-a1-m2-cB 86 32 0.3182 0.2442 0.6562 1.36e-07 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
25 2bh8-a1-m1-cB 86 32 0.3182 0.2442 0.6562 1.36e-07 2bh8-a1-m1-cB_2bh8-a1-m2-cB
26 3aqq-a1-m1-cD 98 54 0.2727 0.1837 0.3333 0.002 3aqq-a1-m1-cC_3aqq-a1-m1-cD, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
27 3aqq-a1-m1-cB 99 54 0.2727 0.1818 0.3333 0.002 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
28 3aqq-a1-m1-cC 97 54 0.2727 0.1856 0.3333 0.003 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cC_3aqq-a1-m1-cD
29 3md1-a4-m5-cB 79 38 0.1970 0.1646 0.3421 0.52 3md1-a4-m4-cB_3md1-a4-m5-cB
30 3md1-a4-m4-cB 79 38 0.1970 0.1646 0.3421 0.52 3md1-a4-m4-cB_3md1-a4-m5-cB
31 2cb1-a1-m4-cA 404 23 0.2121 0.0347 0.6087 0.59 2cb1-a1-m1-cA_2cb1-a1-m4-cA, 2cb1-a1-m2-cA_2cb1-a1-m4-cA, 2cb1-a1-m3-cA_2cb1-a1-m4-cA
32 2cb1-a1-m3-cA 404 23 0.2121 0.0347 0.6087 0.59 2cb1-a1-m3-cA_2cb1-a1-m4-cA
33 2cb1-a1-m2-cA 404 23 0.2121 0.0347 0.6087 0.59 2cb1-a1-m2-cA_2cb1-a1-m4-cA
34 2cb1-a1-m1-cA 404 23 0.2121 0.0347 0.6087 0.59 2cb1-a1-m1-cA_2cb1-a1-m4-cA
35 2o6x-a1-m2-cA 306 58 0.2424 0.0523 0.2759 0.84 2o6x-a1-m1-cA_2o6x-a1-m2-cA
36 2o6x-a1-m1-cA 306 58 0.2424 0.0523 0.2759 0.84 2o6x-a1-m1-cA_2o6x-a1-m2-cA
37 3md3-a2-m2-cA 165 41 0.1970 0.0788 0.3171 0.92 3md3-a2-m1-cA_3md3-a2-m2-cA
38 3md3-a2-m1-cA 165 41 0.1970 0.0788 0.3171 0.92 3md3-a2-m1-cA_3md3-a2-m2-cA
39 1z7m-a2-m1-cA 311 22 0.1970 0.0418 0.5909 3.6 1z7m-a2-m1-cA_1z7m-a2-m1-cB
40 1z7m-a2-m1-cB 318 22 0.1970 0.0409 0.5909 3.6 1z7m-a2-m1-cA_1z7m-a2-m1-cB
41 1z7m-a1-m1-cB 318 22 0.1970 0.0409 0.5909 3.6 1z7m-a1-m1-cD_1z7m-a1-m1-cB
42 6zox-a1-m1-cC 1017 41 0.1970 0.0128 0.3171 4.6 6zox-a1-m1-cB_6zox-a1-m1-cC
43 6zox-a1-m1-cB 1017 41 0.1970 0.0128 0.3171 4.6 6zox-a1-m1-cB_6zox-a1-m1-cC
44 3vyl-a2-m1-cH 297 20 0.1212 0.0269 0.4000 8.9 3vyl-a2-m1-cE_3vyl-a2-m1-cH
45 3vyl-a2-m1-cG 297 20 0.1212 0.0269 0.4000 8.9 3vyl-a2-m1-cE_3vyl-a2-m1-cG
46 3vyl-a2-m1-cE 297 20 0.1212 0.0269 0.4000 8.9 3vyl-a2-m1-cE_3vyl-a2-m1-cG, 3vyl-a2-m1-cE_3vyl-a2-m1-cH
47 3vyl-a1-m1-cD 297 20 0.1212 0.0269 0.4000 8.9 3vyl-a1-m1-cC_3vyl-a1-m1-cD
48 3vyl-a1-m1-cC 297 20 0.1212 0.0269 0.4000 8.9 3vyl-a1-m1-cC_3vyl-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600