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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYK
ILGGSVLHLVLALRGG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ndd-a5-m1-cB 76 76 1.0000 1.0000 1.0000 9.80e-50 1ndd-a5-m1-cD_1ndd-a5-m1-cB
2 1ndd-a5-m1-cA 74 74 0.9737 1.0000 1.0000 3.87e-48 1ndd-a5-m1-cD_1ndd-a5-m1-cA
3 1ndd-a5-m1-cD 73 73 0.9605 1.0000 1.0000 2.84e-47 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
4 1ndd-a5-m1-cC 73 73 0.9605 1.0000 1.0000 2.84e-47 1ndd-a5-m1-cC_1ndd-a5-m1-cD
5 8cx9-a4-m1-cJ 74 74 0.5000 0.5135 0.5135 2.56e-21 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
6 8cx9-a4-m1-cH 74 74 0.5000 0.5135 0.5135 2.56e-21 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
7 6nxl-a3-m1-cD 74 74 0.4737 0.4865 0.4865 6.93e-21 6nxl-a3-m1-cC_6nxl-a3-m1-cD
8 6ob1-a1-m1-cA 75 74 0.4737 0.4800 0.4865 7.76e-21 6ob1-a1-m1-cA_6ob1-a1-m1-cB
9 6njg-a1-m2-cC 76 75 0.4605 0.4605 0.4667 1.22e-20 6njg-a1-m1-cC_6njg-a1-m2-cC
10 6njg-a1-m1-cC 76 75 0.4605 0.4605 0.4667 1.22e-20 6njg-a1-m1-cC_6njg-a1-m2-cC
11 6nxl-a3-m1-cC 73 73 0.4605 0.4795 0.4795 5.01e-20 6nxl-a3-m1-cC_6nxl-a3-m1-cD
12 7rma-a1-m2-cA 75 74 0.4474 0.4533 0.4595 8.18e-20 7rma-a1-m1-cA_7rma-a1-m2-cA
13 7rma-a1-m1-cA 75 74 0.4474 0.4533 0.4595 8.18e-20 7rma-a1-m1-cA_7rma-a1-m2-cA
14 6ob1-a1-m1-cB 75 74 0.4605 0.4667 0.4730 1.21e-19 6ob1-a1-m1-cA_6ob1-a1-m1-cB
15 5o6t-a2-m1-cD 74 73 0.4211 0.4324 0.4384 7.95e-19 5o6t-a2-m1-cD_5o6t-a2-m1-cC
16 5o6t-a2-m1-cC 75 74 0.4211 0.4267 0.4324 8.71e-19 5o6t-a2-m1-cD_5o6t-a2-m1-cC
17 5o6s-a2-m1-cC 75 74 0.4211 0.4267 0.4324 8.71e-19 5o6s-a2-m1-cC_5o6s-a2-m1-cD
18 5o6s-a2-m1-cD 75 73 0.4211 0.4267 0.4384 9.41e-19 5o6s-a2-m1-cC_5o6s-a2-m1-cD
19 6dj9-a3-m1-cI 78 74 0.4211 0.4103 0.4324 1.74e-18 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
20 6dj9-a3-m1-cJ 77 74 0.4211 0.4156 0.4324 1.89e-18 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
21 5tog-a2-m2-cA 75 73 0.4211 0.4267 0.4384 5.20e-16 5tog-a2-m1-cA_5tog-a2-m2-cA
22 5tog-a2-m1-cA 75 73 0.4211 0.4267 0.4384 5.20e-16 5tog-a2-m1-cA_5tog-a2-m2-cA
23 2wyq-a1-m2-cA 77 62 0.3026 0.2987 0.3710 1.45e-06 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 62 0.3026 0.2987 0.3710 1.45e-06 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cA 85 58 0.1711 0.1529 0.2241 0.051 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cB 75 58 0.1711 0.1733 0.2241 0.056 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 7nkg-a2-m1-cK 432 34 0.1974 0.0347 0.4412 0.55 7nkg-a2-m1-cH_7nkg-a2-m1-cK
28 7nkg-a2-m1-cH 432 34 0.1974 0.0347 0.4412 0.55 7nkg-a2-m1-cH_7nkg-a2-m1-cK
29 4qpc-a2-m2-cA 308 37 0.1974 0.0487 0.4054 2.8 4qpc-a2-m1-cA_4qpc-a2-m2-cA
30 4qpc-a2-m1-cA 308 37 0.1974 0.0487 0.4054 2.8 4qpc-a2-m1-cA_4qpc-a2-m2-cA
31 1uzn-a1-m2-cB 226 23 0.1184 0.0398 0.3913 6.6 1uzn-a1-m2-cB_1uzn-a1-m1-cA, 1uzn-a1-m2-cB_1uzn-a1-m2-cA
32 1uzm-a1-m2-cB 211 23 0.1184 0.0427 0.3913 7.9 1uzm-a1-m1-cB_1uzm-a1-m2-cB, 1uzm-a1-m2-cB_1uzm-a1-m2-cA
33 1uzm-a1-m1-cB 211 23 0.1184 0.0427 0.3913 7.9 1uzm-a1-m1-cB_1uzm-a1-m2-cB
34 7a3w-a1-m1-cA 288 72 0.2500 0.0660 0.2639 8.1 7a3w-a1-m1-cA_7a3w-a1-m1-cB
35 7a3w-a1-m1-cB 293 72 0.2500 0.0648 0.2639 8.1 7a3w-a1-m1-cA_7a3w-a1-m1-cB
36 2ntn-a1-m2-cB 207 23 0.1184 0.0435 0.3913 8.5 2ntn-a1-m1-cB_2ntn-a1-m2-cB
37 2ntn-a1-m1-cB 207 23 0.1184 0.0435 0.3913 8.5 2ntn-a1-m1-cB_2ntn-a1-m2-cB
38 1uzm-a1-m2-cA 227 23 0.1184 0.0396 0.3913 9.1 1uzm-a1-m2-cB_1uzm-a1-m2-cA
39 6mg0-a2-m1-cB 1687 36 0.1316 0.0059 0.2778 9.6 6mg0-a2-m1-cB_6mg0-a2-m1-cA
40 6mg0-a2-m1-cA 1692 36 0.1316 0.0059 0.2778 9.8 6mg0-a2-m1-cB_6mg0-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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