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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKDVAVHREEIYQRIQAGLTAPD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mf0-a1-m1-cB 59 59 1.0000 1.0000 1.0000 4.16e-37 2mf0-a1-m1-cA_2mf0-a1-m1-cB
2 2mf0-a1-m1-cA 59 59 1.0000 1.0000 1.0000 4.16e-37 2mf0-a1-m1-cA_2mf0-a1-m1-cB
3 7yr6-a1-m1-cE 55 52 0.6780 0.7273 0.7692 3.10e-26 7yr6-a1-m1-cD_7yr6-a1-m1-cE
4 7yr6-a1-m1-cD 55 52 0.6780 0.7273 0.7692 3.10e-26 7yr6-a1-m1-cD_7yr6-a1-m1-cE
5 1y00-a1-m1-cB 61 53 0.6780 0.6557 0.7547 3.60e-26 1y00-a1-m1-cA_1y00-a1-m1-cB
6 1y00-a1-m1-cA 61 53 0.6780 0.6557 0.7547 3.60e-26 1y00-a1-m1-cA_1y00-a1-m1-cB
7 2bti-a1-m1-cA 56 52 0.6610 0.6964 0.7500 1.16e-23 2bti-a1-m1-cB_2bti-a1-m1-cA
8 2bti-a1-m1-cB 55 52 0.6610 0.7091 0.7500 1.69e-23 2bti-a1-m1-cB_2bti-a1-m1-cA
9 4krw-a1-m2-cA 67 63 0.3220 0.2836 0.3016 0.051 4krw-a1-m1-cA_4krw-a1-m2-cA
10 4krw-a1-m1-cA 67 63 0.3220 0.2836 0.3016 0.051 4krw-a1-m1-cA_4krw-a1-m2-cA
11 2be7-a1-m2-cE 130 37 0.2542 0.1154 0.4054 5.0 2be7-a1-m2-cE_2be7-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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