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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSS
Y

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1y00-a1-m1-cB 61 61 1.0000 1.0000 1.0000 7.17e-39 1y00-a1-m1-cA_1y00-a1-m1-cB
2 1y00-a1-m1-cA 61 61 1.0000 1.0000 1.0000 7.17e-39 1y00-a1-m1-cA_1y00-a1-m1-cB
3 7yr6-a1-m1-cE 55 55 0.8361 0.9273 0.9273 4.88e-32 7yr6-a1-m1-cD_7yr6-a1-m1-cE
4 7yr6-a1-m1-cD 55 55 0.8361 0.9273 0.9273 4.88e-32 7yr6-a1-m1-cD_7yr6-a1-m1-cE
5 2bti-a1-m1-cA 56 56 0.9016 0.9821 0.9821 6.95e-32 2bti-a1-m1-cB_2bti-a1-m1-cA
6 2bti-a1-m1-cB 55 54 0.8689 0.9636 0.9815 2.94e-30 2bti-a1-m1-cB_2bti-a1-m1-cA
7 2mf0-a1-m1-cB 59 53 0.6557 0.6780 0.7547 3.72e-26 2mf0-a1-m1-cA_2mf0-a1-m1-cB
8 2mf0-a1-m1-cA 59 53 0.6557 0.6780 0.7547 3.72e-26 2mf0-a1-m1-cA_2mf0-a1-m1-cB
9 4krw-a1-m2-cA 67 63 0.2951 0.2687 0.2857 0.051 4krw-a1-m1-cA_4krw-a1-m2-cA
10 4krw-a1-m1-cA 67 63 0.2951 0.2687 0.2857 0.051 4krw-a1-m1-cA_4krw-a1-m2-cA
11 8fia-a1-m2-cA 1772 20 0.1803 0.0062 0.5500 7.1 8fia-a1-m1-cA_8fia-a1-m2-cA
12 8fia-a1-m1-cA 1772 20 0.1803 0.0062 0.5500 7.1 8fia-a1-m1-cA_8fia-a1-m2-cA
13 7qod-a1-m1-cA 192 20 0.1311 0.0417 0.4000 9.8 7qod-a1-m1-cB_7qod-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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