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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7yr6-a1-m1-cE 55 55 1.0000 1.0000 1.0000 9.42e-34 7yr6-a1-m1-cD_7yr6-a1-m1-cE
2 7yr6-a1-m1-cD 55 55 1.0000 1.0000 1.0000 9.42e-34 7yr6-a1-m1-cD_7yr6-a1-m1-cE
3 1y00-a1-m1-cB 61 55 0.9273 0.8361 0.9273 4.40e-32 1y00-a1-m1-cA_1y00-a1-m1-cB
4 1y00-a1-m1-cA 61 55 0.9273 0.8361 0.9273 4.40e-32 1y00-a1-m1-cA_1y00-a1-m1-cB
5 2bti-a1-m1-cA 56 54 0.8909 0.8750 0.9074 2.60e-28 2bti-a1-m1-cB_2bti-a1-m1-cA
6 2bti-a1-m1-cB 55 54 0.8909 0.8909 0.9074 4.34e-28 2bti-a1-m1-cB_2bti-a1-m1-cA
7 2mf0-a1-m1-cB 59 52 0.7273 0.6780 0.7692 2.89e-26 2mf0-a1-m1-cA_2mf0-a1-m1-cB
8 2mf0-a1-m1-cA 59 52 0.7273 0.6780 0.7692 2.89e-26 2mf0-a1-m1-cA_2mf0-a1-m1-cB
9 4krw-a1-m2-cA 67 63 0.3818 0.3134 0.3333 0.011 4krw-a1-m1-cA_4krw-a1-m2-cA
10 4krw-a1-m1-cA 67 63 0.3818 0.3134 0.3333 0.011 4krw-a1-m1-cA_4krw-a1-m2-cA
11 3v0r-a1-m4-cA 130 27 0.1818 0.0769 0.3704 3.6 3v0r-a1-m1-cA_3v0r-a1-m4-cA, 3v0r-a1-m2-cA_3v0r-a1-m4-cA
12 3v0r-a1-m2-cA 130 27 0.1818 0.0769 0.3704 3.6 3v0r-a1-m2-cA_3v0r-a1-m4-cA
13 3v0r-a1-m1-cA 130 27 0.1818 0.0769 0.3704 3.6 3v0r-a1-m1-cA_3v0r-a1-m4-cA
14 4aud-a1-m3-cB 121 27 0.1818 0.0826 0.3704 4.0 4aud-a1-m2-cB_4aud-a1-m3-cB, 4aud-a1-m3-cA_4aud-a1-m3-cB
15 4aud-a1-m3-cA 121 27 0.1818 0.0826 0.3704 4.0 4aud-a1-m3-cA_4aud-a1-m3-cB
16 4aud-a1-m2-cB 121 27 0.1818 0.0826 0.3704 4.0 4aud-a1-m2-cB_4aud-a1-m3-cB
17 8fia-a1-m2-cA 1772 20 0.1818 0.0056 0.5000 8.0 8fia-a1-m1-cA_8fia-a1-m2-cA
18 8fia-a1-m1-cA 1772 20 0.1818 0.0056 0.5000 8.0 8fia-a1-m1-cA_8fia-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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