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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MLKEFKEFALKGNVLDLAIAVVMGAAFNKIICSLVENIIMPLIGKIFGSVDFAKEWSFWG
IKYGLFIQSVIDFIIIAFALFIFVKIANTLMKKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hzq-a1-m4-cA 94 94 1.0000 1.0000 1.0000 4.26e-61 3hzq-a1-m2-cA_3hzq-a1-m4-cA
2 3hzq-a1-m2-cA 94 94 1.0000 1.0000 1.0000 4.26e-61 3hzq-a1-m2-cA_3hzq-a1-m4-cA
3 2oar-a2-m2-cE 125 102 0.4043 0.3040 0.3725 1.09e-13 2oar-a2-m2-cA_2oar-a2-m2-cE, 2oar-a2-m2-cB_2oar-a2-m2-cE
4 2oar-a2-m2-cB 125 102 0.4043 0.3040 0.3725 1.09e-13 2oar-a2-m1-cB_2oar-a2-m2-cB, 2oar-a2-m2-cB_2oar-a2-m2-cE
5 2oar-a2-m2-cA 125 102 0.4043 0.3040 0.3725 1.09e-13 2oar-a2-m2-cA_2oar-a2-m2-cE
6 2oar-a2-m1-cB 125 102 0.4043 0.3040 0.3725 1.09e-13 2oar-a2-m1-cB_2oar-a2-m2-cB
7 3pj0-a2-m1-cC 349 54 0.1702 0.0458 0.2963 4.9 3pj0-a2-m1-cC_3pj0-a2-m1-cD
8 3pj0-a2-m1-cD 354 54 0.1702 0.0452 0.2963 4.9 3pj0-a2-m1-cC_3pj0-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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