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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
MLNPVEDYELTLKIEIVKERGANLLSRLYRYQDSQGISIDDESNPWILMSDDLSDLIHTN
IYLVETFDEIERYSGYLDGIERMLEISEKRMVA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2p5t-a3-m1-cG 93 93 1.0000 1.0000 1.0000 2.83e-63 2p5t-a3-m1-cG_2p5t-a3-m1-cE
2 2p5t-a3-m1-cE 95 93 1.0000 0.9789 1.0000 3.22e-63 2p5t-a3-m1-cG_2p5t-a3-m1-cE
3 2plj-a1-m1-cB 363 28 0.0860 0.0220 0.2857 0.69 2plj-a1-m1-cB_2plj-a1-m1-cA
4 2plj-a1-m1-cA 376 28 0.0860 0.0213 0.2857 0.70 2plj-a1-m1-cB_2plj-a1-m1-cA
5 4hei-a3-m1-cB 91 59 0.1505 0.1538 0.2373 1.5 4hei-a3-m1-cB_4hei-a3-m1-cA
6 4hei-a3-m1-cA 92 59 0.1505 0.1522 0.2373 1.5 4hei-a3-m1-cB_4hei-a3-m1-cA
7 7uf8-a1-m1-cD 317 18 0.0860 0.0252 0.4444 4.1 7uf8-a1-m1-cD_7uf8-a1-m1-cB, 7uf8-a1-m1-cD_7uf8-a1-m1-cC
8 7uf8-a1-m1-cC 321 18 0.0860 0.0249 0.4444 4.1 7uf8-a1-m1-cD_7uf8-a1-m1-cC
9 7uf8-a1-m1-cB 332 18 0.0860 0.0241 0.4444 4.2 7uf8-a1-m1-cD_7uf8-a1-m1-cB
10 1yb5-a2-m2-cB 324 44 0.1505 0.0432 0.3182 9.5 1yb5-a2-m1-cA_1yb5-a2-m2-cB, 1yb5-a2-m2-cA_1yb5-a2-m2-cB
11 1yb5-a2-m2-cA 324 44 0.1505 0.0432 0.3182 9.5 1yb5-a2-m2-cA_1yb5-a2-m2-cB
12 1yb5-a2-m1-cA 324 44 0.1505 0.0432 0.3182 9.5 1yb5-a2-m1-cA_1yb5-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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