Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=98)
MLNRVVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN
VKNYLSKGSLAGVDGRLQTRNYVFVTEVVADSVQFLEP

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 7d8j-a1-m2-cB 98 98 1.0000 1.0000 1.0000 4.59e-67 7d8j-a1-m2-cB_7d8j-a1-m1-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
2 7d8j-a1-m2-cA 112 105 1.0000 0.8750 0.9333 3.03e-64 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
3 7d8j-a1-m1-cA 112 105 1.0000 0.8750 0.9333 3.03e-64 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m1-cA
4 5xgt-a1-m1-cB 105 105 0.8776 0.8190 0.8190 4.98e-57 5xgt-a1-m1-cA_5xgt-a1-m1-cB
5 5xgt-a1-m1-cA 104 104 0.8673 0.8173 0.8173 6.37e-56 5xgt-a1-m1-cA_5xgt-a1-m1-cB
6 6bhw-a2-m1-cG 101 104 0.8163 0.7921 0.7692 3.54e-49 6bhw-a2-m1-cE_6bhw-a2-m1-cG
7 6bhx-a1-m1-cA 98 101 0.7959 0.7959 0.7723 4.21e-48 6bhx-a1-m1-cA_6bhx-a1-m1-cC
8 6bhx-a1-m1-cC 102 105 0.7959 0.7647 0.7429 1.38e-47 6bhx-a1-m1-cA_6bhx-a1-m1-cC
9 6bhw-a2-m1-cE 99 103 0.7857 0.7778 0.7476 1.37e-46 6bhw-a2-m1-cE_6bhw-a2-m1-cG, 6bhw-a2-m1-cF_6bhw-a2-m1-cE
10 6bhw-a2-m1-cF 96 102 0.7551 0.7708 0.7255 5.18e-44 6bhw-a2-m1-cF_6bhw-a2-m1-cE
11 3vdy-a1-m2-cB 97 98 0.6020 0.6082 0.6020 3.40e-38 3vdy-a1-m1-cB_3vdy-a1-m2-cB, 3vdy-a1-m2-cB_3vdy-a1-m1-cA
12 3vdy-a1-m1-cB 97 98 0.6020 0.6082 0.6020 3.40e-38 3vdy-a1-m1-cB_3vdy-a1-m2-cB
13 3vdy-a1-m1-cA 101 100 0.5918 0.5743 0.5800 3.50e-37 3vdy-a1-m2-cB_3vdy-a1-m1-cA
14 5odn-a1-m1-cG 102 98 0.3878 0.3725 0.3878 6.06e-18 5odn-a1-m1-cG_5odn-a1-m1-cE
15 5odn-a1-m1-cE 105 101 0.3878 0.3619 0.3762 1.60e-17 5odn-a1-m1-cG_5odn-a1-m1-cE
16 2vw9-a1-m2-cB 105 105 0.3980 0.3714 0.3714 3.24e-16 2vw9-a1-m1-cB_2vw9-a1-m2-cB
17 2vw9-a1-m1-cB 105 105 0.3980 0.3714 0.3714 3.24e-16 2vw9-a1-m1-cB_2vw9-a1-m2-cB
18 1z9f-a2-m4-cA 89 96 0.3878 0.4270 0.3958 4.35e-16 1z9f-a2-m1-cA_1z9f-a2-m4-cA, 1z9f-a2-m3-cA_1z9f-a2-m4-cA
19 1z9f-a2-m3-cA 89 96 0.3878 0.4270 0.3958 4.35e-16 1z9f-a2-m3-cA_1z9f-a2-m4-cA
20 1z9f-a2-m1-cA 89 96 0.3878 0.4270 0.3958 4.35e-16 1z9f-a2-m1-cA_1z9f-a2-m4-cA
21 5odp-a1-m1-cA 99 99 0.3776 0.3737 0.3737 2.04e-15 5odp-a1-m1-cA_5odp-a1-m1-cG
22 5odn-a1-m1-cF 105 103 0.3776 0.3524 0.3592 2.39e-15 5odn-a1-m1-cC_5odn-a1-m1-cF
23 1sru-a1-m1-cA 100 94 0.3776 0.3700 0.3936 3.23e-15 1sru-a1-m1-cA_1sru-a1-m1-cD, 1sru-a1-m1-cC_1sru-a1-m1-cA
24 4mz9-a1-m1-cD 114 98 0.3980 0.3421 0.3980 3.31e-15 4mz9-a1-m1-cB_4mz9-a1-m1-cD, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
25 4mz9-a1-m1-cC 114 98 0.3980 0.3421 0.3980 3.31e-15 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
26 4mz9-a1-m1-cB 114 98 0.3980 0.3421 0.3980 3.31e-15 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cB_4mz9-a1-m1-cD
27 1sru-a1-m1-cD 101 95 0.3776 0.3663 0.3895 4.64e-15 1sru-a1-m1-cA_1sru-a1-m1-cD
28 3tqy-a1-m1-cC 106 101 0.3776 0.3491 0.3663 1.99e-14 3tqy-a1-m1-cD_3tqy-a1-m1-cC
29 5odn-a1-m1-cC 102 102 0.3776 0.3627 0.3627 2.67e-14 5odn-a1-m1-cC_5odn-a1-m1-cF
30 5odp-a1-m1-cG 100 99 0.3673 0.3600 0.3636 2.77e-14 5odp-a1-m1-cA_5odp-a1-m1-cG
31 5odn-a1-m1-cH 99 102 0.3776 0.3737 0.3627 1.11e-13 5odn-a1-m1-cA_5odn-a1-m1-cH
32 5odn-a1-m1-cA 99 102 0.3776 0.3737 0.3627 1.11e-13 5odn-a1-m1-cA_5odn-a1-m1-cD, 5odn-a1-m1-cA_5odn-a1-m1-cH
33 1ue7-a2-m3-cD 95 84 0.3469 0.3579 0.4048 1.38e-13 1ue7-a2-m1-cD_1ue7-a2-m3-cD
34 1ue7-a2-m1-cD 95 84 0.3469 0.3579 0.4048 1.38e-13 1ue7-a2-m1-cD_1ue7-a2-m3-cD
35 5odn-a1-m1-cD 106 102 0.3673 0.3396 0.3529 1.77e-13 5odn-a1-m1-cA_5odn-a1-m1-cD
36 3a5u-a1-m2-cA 118 82 0.3571 0.2966 0.4268 1.97e-13 3a5u-a1-m1-cA_3a5u-a1-m2-cA, 3a5u-a1-m2-cB_3a5u-a1-m2-cA
37 3a5u-a1-m1-cA 118 82 0.3571 0.2966 0.4268 1.97e-13 3a5u-a1-m1-cA_3a5u-a1-m2-cA
38 1x3e-a1-m2-cB 119 82 0.3571 0.2941 0.4268 2.15e-13 1x3e-a1-m2-cA_1x3e-a1-m2-cB
39 1ue1-a1-m2-cB 119 82 0.3367 0.2773 0.4024 9.21e-13 1ue1-a1-m1-cB_1ue1-a1-m2-cB
40 1ue1-a1-m1-cB 119 82 0.3367 0.2773 0.4024 9.21e-13 1ue1-a1-m1-cB_1ue1-a1-m2-cB
41 7f5y-a1-m2-cB 120 82 0.3367 0.2750 0.4024 1.04e-12 7f5y-a1-m2-cA_7f5y-a1-m2-cB
42 3tqy-a1-m1-cD 96 97 0.3673 0.3750 0.3711 1.07e-12 3tqy-a1-m1-cD_3tqy-a1-m1-cC
43 1x3e-a1-m2-cA 110 78 0.3265 0.2909 0.4103 1.28e-12 1x3e-a1-m1-cA_1x3e-a1-m2-cA, 1x3e-a1-m2-cA_1x3e-a1-m2-cB
44 1x3e-a1-m1-cA 110 78 0.3265 0.2909 0.4103 1.28e-12 1x3e-a1-m1-cA_1x3e-a1-m2-cA
45 1ue7-a1-m2-cB 98 84 0.3367 0.3367 0.3929 1.32e-12 1ue7-a1-m2-cB_1ue7-a1-m1-cA, 1ue7-a1-m2-cB_1ue7-a1-m2-cA
46 1ue7-a1-m2-cA 106 81 0.3265 0.3019 0.3951 1.94e-12 1ue7-a1-m2-cB_1ue7-a1-m2-cA
47 1ue7-a1-m1-cA 106 81 0.3265 0.3019 0.3951 1.94e-12 1ue7-a1-m2-cB_1ue7-a1-m1-cA
48 7f5y-a1-m2-cA 109 78 0.3061 0.2752 0.3846 2.87e-12 7f5y-a1-m2-cA_7f5y-a1-m2-cB
49 7f5z-a1-m2-cB 118 80 0.3265 0.2712 0.4000 3.46e-12 7f5z-a1-m1-cB_7f5z-a1-m2-cB, 7f5z-a1-m2-cA_7f5z-a1-m2-cB
50 7f5z-a1-m1-cB 118 80 0.3265 0.2712 0.4000 3.46e-12 7f5z-a1-m1-cB_7f5z-a1-m2-cB
51 3a5u-a1-m2-cB 112 81 0.3469 0.3036 0.4198 4.77e-12 3a5u-a1-m2-cB_3a5u-a1-m2-cA
52 3udg-a2-m1-cB 214 97 0.3673 0.1682 0.3711 5.08e-12 3udg-a2-m1-cB_3udg-a2-m1-cC
53 3udg-a2-m1-cB 214 83 0.2857 0.1308 0.3373 0.003 3udg-a2-m1-cB_3udg-a2-m1-cC
54 7f5z-a1-m2-cA 117 80 0.3163 0.2650 0.3875 5.21e-12 7f5z-a1-m2-cA_7f5z-a1-m2-cB
55 2ihf-a1-m2-cA 205 83 0.3367 0.1610 0.3976 1.92e-11 2ihf-a1-m1-cA_2ihf-a1-m2-cA
56 2ihf-a1-m2-cA 205 76 0.3163 0.1512 0.4079 1.14e-07 2ihf-a1-m1-cA_2ihf-a1-m2-cA
57 2ihf-a1-m1-cA 205 83 0.3367 0.1610 0.3976 1.92e-11 2ihf-a1-m1-cA_2ihf-a1-m2-cA
58 2ihf-a1-m1-cA 205 76 0.3163 0.1512 0.4079 1.14e-07 2ihf-a1-m1-cA_2ihf-a1-m2-cA
59 2fxq-a1-m2-cA 197 99 0.3776 0.1878 0.3737 1.97e-11 2fxq-a1-m1-cA_2fxq-a1-m2-cA
60 2fxq-a1-m2-cA 197 76 0.3265 0.1624 0.4211 3.53e-08 2fxq-a1-m1-cA_2fxq-a1-m2-cA
61 2fxq-a1-m1-cA 197 99 0.3776 0.1878 0.3737 1.97e-11 2fxq-a1-m1-cA_2fxq-a1-m2-cA
62 2fxq-a1-m1-cA 197 76 0.3265 0.1624 0.4211 3.53e-08 2fxq-a1-m1-cA_2fxq-a1-m2-cA
63 3lgj-a1-m1-cB 97 91 0.3571 0.3608 0.3846 2.71e-11 3lgj-a1-m1-cA_3lgj-a1-m1-cB
64 3eiv-a3-m1-cC 111 81 0.3367 0.2973 0.4074 3.36e-11 3eiv-a3-m1-cD_3eiv-a3-m1-cC
65 3pgz-a1-m1-cB 114 100 0.3469 0.2982 0.3400 4.35e-11 3pgz-a1-m1-cA_3pgz-a1-m1-cB
66 3udg-a2-m1-cC 214 76 0.2755 0.1262 0.3553 8.20e-11 3udg-a2-m1-cB_3udg-a2-m1-cC
67 3udg-a2-m1-cC 214 83 0.2857 0.1308 0.3373 0.002 3udg-a2-m1-cB_3udg-a2-m1-cC
68 3lgj-a1-m1-cA 95 90 0.3469 0.3579 0.3778 8.87e-11 3lgj-a1-m1-cA_3lgj-a1-m1-cB
69 7f25-a1-m1-cB 106 81 0.3061 0.2830 0.3704 1.50e-10 7f25-a1-m1-cA_7f25-a1-m1-cB
70 7f25-a1-m1-cA 106 81 0.3061 0.2830 0.3704 1.50e-10 7f25-a1-m1-cA_7f25-a1-m1-cB
71 1sru-a1-m1-cC 96 95 0.3469 0.3542 0.3579 1.56e-10 1sru-a1-m1-cC_1sru-a1-m1-cA
72 3eiv-a2-m1-cB 111 78 0.2959 0.2613 0.3718 1.63e-10 3eiv-a2-m1-cA_3eiv-a2-m1-cB
73 3pgz-a1-m1-cA 109 96 0.3265 0.2936 0.3333 2.43e-10 3pgz-a1-m1-cA_3pgz-a1-m1-cB
74 3eiv-a3-m1-cD 100 84 0.3061 0.3000 0.3571 6.48e-10 3eiv-a3-m1-cD_3eiv-a3-m1-cC
75 3eiv-a1-m1-cD 100 84 0.3061 0.3000 0.3571 6.48e-10 3eiv-a1-m1-cA_3eiv-a1-m1-cD
76 1kaw-a1-m1-cD 96 97 0.3265 0.3333 0.3299 2.07e-09 1kaw-a1-m1-cC_1kaw-a1-m1-cD
77 1kaw-a1-m1-cC 96 97 0.3265 0.3333 0.3299 2.07e-09 1kaw-a1-m1-cA_1kaw-a1-m1-cC, 1kaw-a1-m1-cC_1kaw-a1-m1-cD
78 1kaw-a1-m1-cA 96 97 0.3265 0.3333 0.3299 2.07e-09 1kaw-a1-m1-cA_1kaw-a1-m1-cC
79 3eiv-a2-m1-cA 98 77 0.2857 0.2857 0.3636 4.96e-09 3eiv-a2-m1-cA_3eiv-a2-m1-cB
80 3eiv-a1-m1-cA 98 77 0.2857 0.2857 0.3636 4.96e-09 3eiv-a1-m1-cA_3eiv-a1-m1-cD
81 1se8-a1-m2-cA 205 100 0.3776 0.1805 0.3700 3.04e-08 1se8-a1-m1-cA_1se8-a1-m2-cA
82 1se8-a1-m2-cA 205 22 0.1327 0.0634 0.5909 0.13 1se8-a1-m1-cA_1se8-a1-m2-cA
83 1se8-a1-m1-cA 205 100 0.3776 0.1805 0.3700 3.04e-08 1se8-a1-m1-cA_1se8-a1-m2-cA
84 1se8-a1-m1-cA 205 22 0.1327 0.0634 0.5909 0.13 1se8-a1-m1-cA_1se8-a1-m2-cA
85 3ulp-a1-m1-cB 114 84 0.2653 0.2281 0.3095 3.41e-08 3ulp-a1-m1-cD_3ulp-a1-m1-cB
86 3ulp-a1-m1-cD 113 83 0.2551 0.2212 0.3012 1.03e-07 3ulp-a1-m1-cD_3ulp-a1-m1-cA, 3ulp-a1-m1-cD_3ulp-a1-m1-cB, 3ulp-a1-m1-cD_3ulp-a1-m1-cC
87 3ulp-a1-m1-cA 114 85 0.2551 0.2193 0.2941 2.18e-07 3ulp-a1-m1-cD_3ulp-a1-m1-cA
88 3ulp-a1-m1-cC 116 85 0.2653 0.2241 0.3059 2.91e-07 3ulp-a1-m1-cD_3ulp-a1-m1-cC
89 2dud-a2-m2-cA 95 102 0.2959 0.3053 0.2843 2.82e-04 2dud-a2-m2-cB_2dud-a2-m2-cA
90 2dud-a2-m1-cA 95 102 0.2959 0.3053 0.2843 2.82e-04 2dud-a2-m2-cB_2dud-a2-m1-cA
91 2dud-a2-m2-cB 92 102 0.2959 0.3152 0.2843 0.002 2dud-a2-m2-cB_2dud-a2-m1-cA, 2dud-a2-m2-cB_2dud-a2-m2-cA
92 1txy-a1-m1-cA 89 78 0.1939 0.2135 0.2436 0.072 1txy-a1-m1-cB_1txy-a1-m1-cA
93 1woc-a1-m1-cD 97 73 0.1939 0.1959 0.2603 0.13 1woc-a1-m1-cB_1woc-a1-m1-cD
94 1woc-a1-m1-cB 97 73 0.1939 0.1959 0.2603 0.13 1woc-a1-m1-cB_1woc-a1-m1-cD
95 2ex2-a1-m2-cA 456 58 0.1837 0.0395 0.3103 0.30 2ex2-a1-m1-cA_2ex2-a1-m2-cA
96 2ex2-a1-m1-cA 456 58 0.1837 0.0395 0.3103 0.30 2ex2-a1-m1-cA_2ex2-a1-m2-cA
97 6awa-a1-m1-cB 475 61 0.1939 0.0400 0.3115 0.43 6awa-a1-m1-cA_6awa-a1-m1-cB
98 6awa-a1-m1-cA 475 61 0.1939 0.0400 0.3115 0.43 6awa-a1-m1-cA_6awa-a1-m1-cB
99 2wkd-a1-m2-cA 77 55 0.1735 0.2208 0.3091 2.9 2wkd-a1-m1-cA_2wkd-a1-m2-cA
100 2wkd-a1-m1-cA 77 55 0.1735 0.2208 0.3091 2.9 2wkd-a1-m1-cA_2wkd-a1-m2-cA
101 1p9h-a1-m3-cA 179 39 0.1531 0.0838 0.3846 4.6 1p9h-a1-m2-cA_1p9h-a1-m3-cA
102 1p9h-a1-m2-cA 179 39 0.1531 0.0838 0.3846 4.6 1p9h-a1-m2-cA_1p9h-a1-m3-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600