Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
MLQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQ
LRANIS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hqa-a3-m1-cA 66 66 1.0000 1.0000 1.0000 7.54e-44 3hqa-a3-m1-cB_3hqa-a3-m1-cA
2 3cu7-a3-m1-cB 1481 66 0.9848 0.0439 0.9848 1.55e-42 3cu7-a3-m1-cB_3cu7-a3-m1-cA
3 3cu7-a3-m1-cA 1625 66 0.9848 0.0400 0.9848 1.55e-42 3cu7-a3-m1-cB_3cu7-a3-m1-cA
4 3hqa-a3-m1-cB 64 64 0.9697 1.0000 1.0000 5.24e-42 3hqa-a3-m1-cB_3hqa-a3-m1-cA
5 4p39-a7-m1-cB 69 65 0.9697 0.9275 0.9846 1.69e-41 4p39-a7-m1-cB_4p39-a7-m3-cC
6 4p39-a5-m1-cB 69 65 0.9697 0.9275 0.9846 1.69e-41 4p39-a5-m1-cA_4p39-a5-m1-cB
7 4p39-a5-m1-cA 69 65 0.9697 0.9275 0.9846 1.69e-41 4p39-a5-m1-cA_4p39-a5-m1-cB
8 4p39-a7-m3-cC 69 65 0.9697 0.9275 0.9846 2.22e-41 4p39-a7-m1-cB_4p39-a7-m3-cC
9 4p3a-a6-m1-cD 69 62 0.6212 0.5942 0.6613 3.91e-26 4p3a-a6-m1-cC_4p3a-a6-m1-cD
10 4p3a-a6-m1-cC 68 62 0.6212 0.6029 0.6613 4.07e-26 4p3a-a6-m1-cC_4p3a-a6-m1-cD
11 4hw5-a3-m1-cB 77 63 0.3182 0.2727 0.3333 1.20e-04 4hw5-a3-m1-cA_4hw5-a3-m1-cB
12 4hw5-a3-m1-cA 77 63 0.3182 0.2727 0.3333 1.20e-04 4hw5-a3-m1-cA_4hw5-a3-m1-cB
13 2vyc-a2-m3-cJ 755 38 0.2424 0.0212 0.4211 0.18 2vyc-a2-m1-cG_2vyc-a2-m3-cJ, 2vyc-a2-m3-cI_2vyc-a2-m3-cJ
14 2vyc-a2-m3-cI 755 38 0.2424 0.0212 0.4211 0.18 2vyc-a2-m3-cI_2vyc-a2-m3-cJ
15 2vyc-a2-m1-cG 755 38 0.2424 0.0212 0.4211 0.18 2vyc-a2-m1-cG_2vyc-a2-m3-cJ
16 2pgw-a1-m1-cH 363 17 0.1667 0.0303 0.6471 1.1 2pgw-a1-m1-cD_2pgw-a1-m1-cH, 2pgw-a1-m1-cF_2pgw-a1-m1-cH, 2pgw-a1-m1-cH_2pgw-a1-m1-cC
17 2pgw-a1-m1-cF 363 17 0.1667 0.0303 0.6471 1.1 2pgw-a1-m1-cF_2pgw-a1-m1-cH
18 2pgw-a1-m1-cD 363 17 0.1667 0.0303 0.6471 1.1 2pgw-a1-m1-cD_2pgw-a1-m1-cH
19 2pgw-a1-m1-cC 366 17 0.1667 0.0301 0.6471 1.1 2pgw-a1-m1-cH_2pgw-a1-m1-cC
20 3qwe-a1-m2-cA 260 51 0.2727 0.0692 0.3529 7.0 3qwe-a1-m1-cA_3qwe-a1-m2-cA
21 3qwe-a1-m1-cA 260 51 0.2727 0.0692 0.3529 7.0 3qwe-a1-m1-cA_3qwe-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600