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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MLQPPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVDLTSSITSLTLT
NLEPNTTYEIRIVARNGQQYSPPVSTTFTTGSLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3b83-a1-m8-cG 99 94 1.0000 0.9495 1.0000 3.72e-63 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
2 3b83-a1-m4-cE 99 94 1.0000 0.9495 1.0000 3.72e-63 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
3 3b83-a1-m4-cC 99 94 1.0000 0.9495 1.0000 3.72e-63 3b83-a1-m4-cC_3b83-a1-m4-cE
4 3b83-a1-m2-cE 99 94 1.0000 0.9495 1.0000 3.72e-63 3b83-a1-m2-cE_3b83-a1-m8-cG
5 3b83-a1-m1-cC 99 94 1.0000 0.9495 1.0000 3.72e-63 3b83-a1-m1-cC_3b83-a1-m4-cE
6 3b83-a1-m2-cA 95 94 1.0000 0.9895 1.0000 9.42e-63 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m8-cB_3b83-a1-m2-cA
7 3b83-a5-m1-cH 94 94 1.0000 1.0000 1.0000 1.23e-62 3b83-a5-m1-cD_3b83-a5-m1-cH
8 3b83-a1-m8-cH 94 94 1.0000 1.0000 1.0000 1.23e-62 3b83-a1-m5-cD_3b83-a1-m8-cH
9 3b83-a1-m8-cB 92 92 0.9787 1.0000 1.0000 8.45e-61 3b83-a1-m8-cB_3b83-a1-m2-cA, 3b83-a1-m8-cD_3b83-a1-m8-cB
10 3b83-a1-m4-cF 92 92 0.9787 1.0000 1.0000 8.45e-61 3b83-a1-m4-cF_3b83-a1-m4-cE
11 3b83-a5-m1-cD 91 91 0.9681 1.0000 1.0000 4.35e-60 3b83-a5-m1-cD_3b83-a5-m1-cH
12 3b83-a1-m8-cD 91 91 0.9681 1.0000 1.0000 4.35e-60 3b83-a1-m8-cD_3b83-a1-m8-cB
13 3b83-a1-m5-cD 91 91 0.9681 1.0000 1.0000 4.35e-60 3b83-a1-m5-cD_3b83-a1-m8-cH
14 2rbl-a1-m1-cB 89 89 0.3936 0.4157 0.4157 2.05e-20 2rbl-a1-m1-cA_2rbl-a1-m1-cB
15 2rbl-a1-m1-cA 89 89 0.3936 0.4157 0.4157 2.05e-20 2rbl-a1-m1-cA_2rbl-a1-m1-cB
16 2ck2-a1-m1-cB 96 90 0.2872 0.2812 0.3000 8.35e-07 2ck2-a1-m1-cA_2ck2-a1-m1-cB
17 2ck2-a1-m1-cA 94 88 0.2872 0.2872 0.3068 2.37e-06 2ck2-a1-m1-cA_2ck2-a1-m1-cB
18 5myb-a1-m1-cB 191 78 0.2979 0.1466 0.3590 3.77e-05 5myb-a1-m1-cA_5myb-a1-m1-cB
19 5myb-a1-m1-cB 191 71 0.2340 0.1152 0.3099 0.009 5myb-a1-m1-cA_5myb-a1-m1-cB
20 5myb-a1-m1-cA 190 79 0.2872 0.1421 0.3418 4.02e-05 5myb-a1-m1-cA_5myb-a1-m1-cB
21 5myb-a1-m1-cA 190 71 0.2447 0.1211 0.3239 7.22e-04 5myb-a1-m1-cA_5myb-a1-m1-cB
22 5j7k-a2-m1-cB 90 88 0.3191 0.3333 0.3409 5.06e-05 5j7k-a2-m1-cF_5j7k-a2-m1-cB
23 3t1w-a1-m2-cA 368 81 0.2872 0.0734 0.3333 6.24e-05 3t1w-a1-m1-cA_3t1w-a1-m2-cA
24 3t1w-a1-m2-cA 368 89 0.2872 0.0734 0.3034 1.18e-04 3t1w-a1-m1-cA_3t1w-a1-m2-cA
25 3t1w-a1-m1-cA 368 81 0.2872 0.0734 0.3333 6.24e-05 3t1w-a1-m1-cA_3t1w-a1-m2-cA
26 3t1w-a1-m1-cA 368 89 0.2872 0.0734 0.3034 1.18e-04 3t1w-a1-m1-cA_3t1w-a1-m2-cA
27 4lpu-a1-m1-cB 93 92 0.2660 0.2688 0.2717 9.39e-05 4lpu-a1-m1-cA_4lpu-a1-m1-cB
28 4lpu-a1-m1-cA 93 92 0.2660 0.2688 0.2717 9.39e-05 4lpu-a1-m1-cA_4lpu-a1-m1-cB
29 7y8s-a1-m1-cB 288 93 0.2766 0.0903 0.2796 1.40e-04 7y8s-a1-m1-cA_7y8s-a1-m1-cB
30 7y8s-a1-m1-cB 288 74 0.2128 0.0694 0.2703 3.9 7y8s-a1-m1-cA_7y8s-a1-m1-cB
31 5j7k-a1-m1-cA 84 88 0.2979 0.3333 0.3182 0.002 5j7k-a1-m1-cC_5j7k-a1-m1-cA
32 5j7k-a2-m1-cG 85 91 0.3191 0.3529 0.3297 0.002 5j7k-a2-m1-cD_5j7k-a2-m1-cG
33 5fn8-a2-m3-cA 178 68 0.2021 0.1067 0.2794 0.002 5fn8-a2-m1-cA_5fn8-a2-m3-cA
34 5fn8-a2-m1-cA 178 68 0.2021 0.1067 0.2794 0.002 5fn8-a2-m1-cA_5fn8-a2-m3-cA
35 1qg3-a1-m2-cB 193 62 0.2128 0.1036 0.3226 0.003 1qg3-a1-m2-cB_1qg3-a1-m1-cA
36 1qg3-a1-m1-cA 195 62 0.2128 0.1026 0.3226 0.003 1qg3-a1-m2-cB_1qg3-a1-m1-cA
37 5utk-a1-m1-cA 289 76 0.2660 0.0865 0.3289 0.003 5utk-a1-m1-cB_5utk-a1-m1-cA
38 5utk-a1-m1-cA 289 70 0.2340 0.0761 0.3143 0.17 5utk-a1-m1-cB_5utk-a1-m1-cA
39 5utk-a1-m1-cA 289 39 0.1809 0.0588 0.4359 0.62 5utk-a1-m1-cB_5utk-a1-m1-cA
40 5utk-a1-m1-cB 280 78 0.2766 0.0929 0.3333 0.008 5utk-a1-m1-cB_5utk-a1-m1-cA
41 5utk-a1-m1-cB 280 37 0.1596 0.0536 0.4054 5.3 5utk-a1-m1-cB_5utk-a1-m1-cA
42 5j7k-a2-m1-cF 79 70 0.2340 0.2785 0.3143 0.009 5j7k-a2-m1-cF_5j7k-a2-m1-cB
43 7y8s-a1-m1-cA 275 71 0.1915 0.0655 0.2535 0.041 7y8s-a1-m1-cA_7y8s-a1-m1-cB
44 7y8s-a1-m1-cA 275 74 0.2128 0.0727 0.2703 4.2 7y8s-a1-m1-cA_7y8s-a1-m1-cB
45 5j7k-a1-m1-cC 78 70 0.2234 0.2692 0.3000 0.042 5j7k-a1-m1-cC_5j7k-a1-m1-cA
46 6bqo-a2-m2-cC 95 70 0.1596 0.1579 0.2143 0.10 6bqo-a2-m1-cC_6bqo-a2-m2-cC
47 6bqo-a2-m1-cC 95 70 0.1596 0.1579 0.2143 0.10 6bqo-a2-m1-cC_6bqo-a2-m2-cC
48 4lsd-a2-m1-cD 93 81 0.2340 0.2366 0.2716 0.24 4lsd-a2-m1-cC_4lsd-a2-m1-cD
49 4lsd-a2-m1-cC 93 81 0.2340 0.2366 0.2716 0.24 4lsd-a2-m1-cC_4lsd-a2-m1-cD
50 1bqu-a1-m1-cA 208 86 0.2660 0.1202 0.2907 0.47 1bqu-a1-m1-cA_1bqu-a1-m1-cB
51 2vkx-a2-m1-cD 198 65 0.2021 0.0960 0.2923 0.78 2vkx-a2-m1-cC_2vkx-a2-m1-cD
52 2vkx-a2-m1-cD 198 22 0.1064 0.0505 0.4545 1.4 2vkx-a2-m1-cC_2vkx-a2-m1-cD
53 2vkx-a2-m1-cC 198 65 0.2021 0.0960 0.2923 0.78 2vkx-a2-m1-cC_2vkx-a2-m1-cD
54 2vkx-a2-m1-cC 198 22 0.1064 0.0505 0.4545 1.4 2vkx-a2-m1-cC_2vkx-a2-m1-cD
55 2vkw-a1-m1-cA 197 63 0.2021 0.0964 0.3016 0.95 2vkw-a1-m1-cB_2vkw-a1-m1-cA
56 2vkw-a1-m1-cA 197 22 0.1064 0.0508 0.4545 1.4 2vkw-a1-m1-cB_2vkw-a1-m1-cA
57 2vkw-a1-m1-cB 195 63 0.2021 0.0974 0.3016 1.0 2vkw-a1-m1-cB_2vkw-a1-m1-cA
58 2vkw-a1-m1-cB 195 22 0.1064 0.0513 0.4545 1.4 2vkw-a1-m1-cB_2vkw-a1-m1-cA
59 3mtr-a1-m1-cB 197 54 0.1702 0.0812 0.2963 1.4 3mtr-a1-m1-cA_3mtr-a1-m1-cB
60 3mtr-a1-m1-cA 197 22 0.1064 0.0508 0.4545 1.4 3mtr-a1-m1-cA_3mtr-a1-m1-cB
61 3fl7-a1-m2-cA 482 23 0.1170 0.0228 0.4783 1.9 3fl7-a1-m1-cA_3fl7-a1-m2-cA
62 3fl7-a1-m1-cA 482 23 0.1170 0.0228 0.4783 1.9 3fl7-a1-m1-cA_3fl7-a1-m2-cA
63 8e2d-a1-m1-cB 1968 52 0.2128 0.0102 0.3846 2.0 8e2d-a1-m1-cA_8e2d-a1-m1-cB
64 8e2d-a1-m1-cA 1968 52 0.2128 0.0102 0.3846 2.0 8e2d-a1-m1-cA_8e2d-a1-m1-cB
65 2v5y-a1-m2-cA 564 36 0.1383 0.0230 0.3611 2.1 2v5y-a1-m1-cA_2v5y-a1-m2-cA
66 2v5y-a1-m1-cA 564 36 0.1383 0.0230 0.3611 2.1 2v5y-a1-m1-cA_2v5y-a1-m2-cA
67 1bqu-a1-m1-cB 215 88 0.2660 0.1163 0.2841 2.2 1bqu-a1-m1-cA_1bqu-a1-m1-cB
68 5x83-a1-m1-cD 195 80 0.2128 0.1026 0.2500 2.4 5x83-a1-m1-cD_5x83-a1-m1-cB
69 3up1-a1-m1-cB 196 39 0.1277 0.0612 0.3077 2.4 3up1-a1-m1-cB_3up1-a1-m1-cA
70 3up1-a1-m1-cA 201 39 0.1277 0.0597 0.3077 2.5 3up1-a1-m1-cB_3up1-a1-m1-cA
71 4yfg-a1-m1-cB 481 75 0.2234 0.0437 0.2800 4.4 4yfg-a1-m1-cA_4yfg-a1-m1-cB
72 4yfg-a1-m1-cA 481 75 0.2234 0.0437 0.2800 4.4 4yfg-a1-m1-cA_4yfg-a1-m1-cB
73 7mrm-a1-m1-cA 365 82 0.2447 0.0630 0.2805 5.5 7mrm-a1-m1-cB_7mrm-a1-m1-cA
74 7mrm-a1-m1-cB 360 82 0.2447 0.0639 0.2805 5.5 7mrm-a1-m1-cB_7mrm-a1-m1-cA
75 5x83-a1-m1-cB 202 87 0.2128 0.0990 0.2299 7.7 5x83-a1-m1-cD_5x83-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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