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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLAPKYKDHPLKGGLKDFRECH
LKPDLLLVYQIKKQENTLFLVRLGSHSELF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4nrn-a3-m1-cB 90 90 1.0000 1.0000 1.0000 9.56e-61 4nrn-a3-m1-cA_4nrn-a3-m1-cB
2 4nrn-a3-m1-cA 90 90 1.0000 1.0000 1.0000 9.56e-61 4nrn-a3-m1-cA_4nrn-a3-m1-cB
3 1vc4-a4-m3-cB 254 62 0.1889 0.0669 0.2742 0.82 1vc4-a4-m1-cA_1vc4-a4-m3-cB
4 1vc4-a4-m1-cA 254 62 0.1889 0.0669 0.2742 0.82 1vc4-a4-m1-cA_1vc4-a4-m3-cB
5 1vc4-a3-m2-cA 254 62 0.1889 0.0669 0.2742 0.82 1vc4-a3-m1-cB_1vc4-a3-m2-cA
6 1vc4-a3-m1-cB 254 62 0.1889 0.0669 0.2742 0.82 1vc4-a3-m1-cB_1vc4-a3-m2-cA
7 3byi-a5-m1-cB 211 87 0.3111 0.1327 0.3218 0.92 3byi-a5-m1-cD_3byi-a5-m1-cB
8 3byi-a5-m1-cA 211 87 0.3111 0.1327 0.3218 0.92 3byi-a5-m1-cD_3byi-a5-m1-cA
9 1y8g-a1-m1-cB 292 39 0.1444 0.0445 0.3333 0.95 1y8g-a1-m1-cA_1y8g-a1-m1-cB
10 3byi-a5-m1-cC 210 87 0.3111 0.1333 0.3218 0.96 3byi-a5-m1-cD_3byi-a5-m1-cC
11 1y8g-a1-m1-cA 292 39 0.1444 0.0445 0.3333 0.99 1y8g-a1-m1-cA_1y8g-a1-m1-cB
12 3byi-a5-m1-cD 209 87 0.3111 0.1340 0.3218 1.0 3byi-a5-m1-cD_3byi-a5-m1-cA, 3byi-a5-m1-cD_3byi-a5-m1-cB, 3byi-a5-m1-cD_3byi-a5-m1-cC
13 2qm0-a2-m2-cB 265 49 0.1889 0.0642 0.3469 1.2 2qm0-a2-m1-cB_2qm0-a2-m2-cB, 2qm0-a2-m2-cA_2qm0-a2-m2-cB
14 2qm0-a2-m1-cB 265 49 0.1889 0.0642 0.3469 1.2 2qm0-a2-m1-cB_2qm0-a2-m2-cB
15 3urh-a1-m1-cA 449 41 0.1889 0.0379 0.4146 3.7 3urh-a1-m1-cA_3urh-a1-m1-cB
16 3urh-a1-m1-cB 453 41 0.1889 0.0375 0.4146 3.7 3urh-a1-m1-cA_3urh-a1-m1-cB
17 3e0o-a1-m1-cC 139 42 0.1556 0.1007 0.3333 5.5 3e0o-a1-m1-cC_3e0o-a1-m1-cE, 3e0o-a1-m1-cC_3e0o-a1-m1-cF
18 3e0o-a1-m1-cF 141 42 0.1556 0.0993 0.3333 5.9 3e0o-a1-m1-cC_3e0o-a1-m1-cF
19 3e0o-a1-m1-cE 141 42 0.1556 0.0993 0.3333 5.9 3e0o-a1-m1-cC_3e0o-a1-m1-cE
20 3e0o-a1-m1-cB 142 42 0.1556 0.0986 0.3333 5.9 3e0o-a1-m1-cA_3e0o-a1-m1-cB
21 3e0o-a1-m1-cA 142 42 0.1556 0.0986 0.3333 5.9 3e0o-a1-m1-cA_3e0o-a1-m1-cB
22 3thp-a3-m4-cA 297 35 0.1667 0.0505 0.4286 8.8 3thp-a3-m1-cA_3thp-a3-m4-cA
23 3thp-a3-m1-cA 297 35 0.1667 0.0505 0.4286 8.8 3thp-a3-m1-cA_3thp-a3-m4-cA

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Reference:
Jacob Schwartz et al.

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