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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
MLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKL
DEDAVCIYVLDENTVQRTITYGTPQPEKPGSII

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7cr8-a6-m1-cF 93 93 1.0000 1.0000 1.0000 1.91e-66 7cr8-a6-m1-cE_7cr8-a6-m1-cF
2 7cr8-a6-m1-cE 93 93 1.0000 1.0000 1.0000 1.91e-66 7cr8-a6-m1-cE_7cr8-a6-m1-cF
3 7mid-a1-m1-cC 95 66 0.2473 0.2421 0.3485 1.31e-08 7mid-a1-m1-cD_7mid-a1-m1-cC
4 4qr2-a1-m1-cA 83 83 0.3011 0.3373 0.3373 1.40e-08 4qr2-a1-m1-cB_4qr2-a1-m1-cA
5 7mid-a1-m1-cD 91 66 0.2473 0.2527 0.3485 1.41e-08 7mid-a1-m1-cD_7mid-a1-m1-cC
6 4es1-a1-m2-cA 95 74 0.2903 0.2842 0.3649 1.61e-08 4es1-a1-m1-cA_4es1-a1-m2-cA
7 4es1-a1-m1-cA 95 74 0.2903 0.2842 0.3649 1.61e-08 4es1-a1-m1-cA_4es1-a1-m2-cA
8 8d3q-a1-m1-cF 98 74 0.2903 0.2755 0.3649 1.97e-08 8d3q-a1-m1-cE_8d3q-a1-m1-cF
9 8d3q-a1-m1-cE 98 74 0.2903 0.2755 0.3649 1.97e-08 8d3q-a1-m1-cE_8d3q-a1-m1-cF
10 3oq2-a3-m3-cA 99 93 0.3333 0.3131 0.3333 7.46e-08 3oq2-a3-m3-cA_3oq2-a3-m4-cB
11 3oq2-a3-m1-cA 99 93 0.3333 0.3131 0.3333 7.46e-08 3oq2-a3-m1-cA_3oq2-a3-m4-cB
12 3oq2-a2-m2-cA 99 93 0.3333 0.3131 0.3333 7.46e-08 3oq2-a2-m2-cA_3oq2-a2-m2-cB
13 3oq2-a3-m4-cB 102 93 0.3333 0.3039 0.3333 7.58e-08 3oq2-a3-m1-cA_3oq2-a3-m4-cB, 3oq2-a3-m3-cA_3oq2-a3-m4-cB
14 3oq2-a2-m2-cB 102 93 0.3333 0.3039 0.3333 7.58e-08 3oq2-a2-m2-cA_3oq2-a2-m2-cB
15 4qr2-a1-m1-cB 82 81 0.2903 0.3293 0.3333 9.96e-08 4qr2-a1-m1-cB_4qr2-a1-m1-cA
16 6k2e-a1-m1-cA 88 70 0.2688 0.2841 0.3571 5.75e-07 6k2e-a1-m1-cB_6k2e-a1-m1-cA
17 6k2e-a1-m1-cB 87 70 0.2688 0.2874 0.3571 6.20e-07 6k2e-a1-m1-cB_6k2e-a1-m1-cA
18 5g4d-a1-m2-cA 79 70 0.2581 0.3038 0.3429 4.19e-06 5g4d-a1-m1-cA_5g4d-a1-m2-cA
19 5g4d-a1-m1-cA 79 70 0.2581 0.3038 0.3429 4.19e-06 5g4d-a1-m1-cA_5g4d-a1-m2-cA
20 7f84-a1-m1-cB 89 83 0.2581 0.2697 0.2892 4.46e-06 7f84-a1-m1-cA_7f84-a1-m1-cB
21 7f84-a1-m1-cA 89 83 0.2581 0.2697 0.2892 4.46e-06 7f84-a1-m1-cA_7f84-a1-m1-cB
22 1zpw-a2-m2-cX 82 67 0.2796 0.3171 0.3881 1.04e-05 1zpw-a2-m1-cX_1zpw-a2-m2-cX
23 1zpw-a2-m1-cX 82 67 0.2796 0.3171 0.3881 1.04e-05 1zpw-a2-m1-cX_1zpw-a2-m2-cX
24 7ei1-a1-m1-cR 84 70 0.2258 0.2500 0.3000 1.57e-05 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
25 7ei1-a1-m1-cQ 84 70 0.2258 0.2500 0.3000 1.57e-05 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
26 7kfu-a1-m1-cB 96 96 0.3118 0.3021 0.3021 1.94e-04 7kfu-a1-m1-cA_7kfu-a1-m1-cB
27 7kfu-a1-m1-cA 96 96 0.3118 0.3021 0.3021 1.94e-04 7kfu-a1-m1-cA_7kfu-a1-m1-cB
28 5h1o-a1-m1-cB 83 83 0.2796 0.3133 0.3133 4.51e-04 5h1o-a1-m1-cB_5h1o-a1-m1-cA
29 5h1o-a1-m1-cA 86 84 0.2688 0.2907 0.2976 0.001 5h1o-a1-m1-cB_5h1o-a1-m1-cA
30 2ivy-a1-m2-cA 88 90 0.3011 0.3182 0.3111 1.4 2ivy-a1-m1-cA_2ivy-a1-m2-cA
31 2ivy-a1-m1-cA 88 90 0.3011 0.3182 0.3111 1.4 2ivy-a1-m1-cA_2ivy-a1-m2-cA
32 6cgs-a1-m1-cB 207 51 0.1720 0.0773 0.3137 2.8 6cgs-a1-m1-cA_6cgs-a1-m1-cB
33 6cgs-a1-m1-cA 207 51 0.1720 0.0773 0.3137 2.8 6cgs-a1-m1-cA_6cgs-a1-m1-cB
34 4aw2-a1-m2-cA 398 36 0.1183 0.0276 0.3056 2.9 4aw2-a1-m1-cA_4aw2-a1-m2-cA
35 4aw2-a1-m1-cA 398 36 0.1183 0.0276 0.3056 2.9 4aw2-a1-m1-cA_4aw2-a1-m2-cA
36 6v78-a1-m1-cC 353 18 0.0968 0.0255 0.5000 5.1 6v78-a1-m1-cA_6v78-a1-m1-cC
37 6v78-a1-m1-cA 353 18 0.0968 0.0255 0.5000 5.1 6v78-a1-m1-cA_6v78-a1-m1-cC
38 5otf-a1-m2-cA 411 32 0.1183 0.0268 0.3438 6.0 5otf-a1-m1-cA_5otf-a1-m2-cA
39 5otf-a1-m1-cA 411 32 0.1183 0.0268 0.3438 6.0 5otf-a1-m1-cA_5otf-a1-m2-cA
40 1i2k-a1-m2-cA 269 54 0.1613 0.0558 0.2778 6.6 1i2k-a1-m1-cA_1i2k-a1-m2-cA
41 1i2k-a1-m1-cA 269 54 0.1613 0.0558 0.2778 6.6 1i2k-a1-m1-cA_1i2k-a1-m2-cA
42 7ebl-a1-m1-cB 167 58 0.1720 0.0958 0.2759 8.6 7ebl-a1-m1-cA_7ebl-a1-m1-cB
43 6ene-a1-m1-cC 329 25 0.1075 0.0304 0.4000 9.0 6ene-a1-m1-cB_6ene-a1-m1-cC
44 6ene-a1-m1-cB 329 25 0.1075 0.0304 0.4000 9.0 6ene-a1-m1-cB_6ene-a1-m1-cC
45 7ebl-a1-m1-cA 164 58 0.1720 0.0976 0.2759 9.3 7ebl-a1-m1-cA_7ebl-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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