Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MLYLVRMTVNLPRNLDPREEERLKASEKARSRTLQEQGQWRYLWRTTGKYGNISVFDVNS
HDELHEILWSLPFFPYLTIDVEPLSHHPARVGKD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3znj-a2-m1-cJ 94 94 1.0000 1.0000 1.0000 2.19e-67 3znj-a2-m1-cI_3znj-a2-m1-cJ
2 3znj-a2-m1-cI 94 94 1.0000 1.0000 1.0000 2.19e-67 3znj-a2-m1-cI_3znj-a2-m1-cJ
3 3znj-a2-m1-cD 94 94 1.0000 1.0000 1.0000 2.19e-67 3znj-a2-m1-cA_3znj-a2-m1-cD, 3znj-a2-m1-cB_3znj-a2-m1-cD
4 3znj-a2-m1-cB 94 94 1.0000 1.0000 1.0000 2.19e-67 3znj-a2-m1-cB_3znj-a2-m1-cD
5 3znj-a2-m1-cA 94 94 1.0000 1.0000 1.0000 2.19e-67 3znj-a2-m1-cA_3znj-a2-m1-cD
6 6kbw-a1-m1-cB 446 85 0.2660 0.0561 0.2941 0.31 6kbw-a1-m1-cA_6kbw-a1-m1-cB
7 6kbw-a1-m1-cA 446 85 0.2660 0.0561 0.2941 0.31 6kbw-a1-m1-cA_6kbw-a1-m1-cB
8 4nzj-a2-m2-cA 456 70 0.2340 0.0482 0.3143 5.2 4nzj-a2-m1-cA_4nzj-a2-m2-cA
9 4nzj-a2-m1-cA 456 70 0.2340 0.0482 0.3143 5.2 4nzj-a2-m1-cA_4nzj-a2-m2-cA
10 7k6v-a1-m4-cOB 523 36 0.1489 0.0268 0.3889 8.6 7k6v-a1-m4-cBB_7k6v-a1-m4-cOB
11 7k6v-a1-m4-cNB 523 36 0.1489 0.0268 0.3889 8.6 7k6v-a1-m4-cNA_7k6v-a1-m4-cNB
12 7k6v-a1-m4-cBB 523 36 0.1489 0.0268 0.3889 8.6 7k6v-a1-m4-cBB_7k6v-a1-m4-cOB
13 7k6v-a1-m4-cKC 507 36 0.1489 0.0276 0.3889 8.8 7k6v-a1-m4-cKA_7k6v-a1-m4-cKC
14 7k6v-a1-m4-cOA 499 36 0.1489 0.0281 0.3889 9.0 7k6v-a1-m4-cNA_7k6v-a1-m4-cOA
15 7k6v-a1-m4-cNA 499 36 0.1489 0.0281 0.3889 9.0 7k6v-a1-m4-cNA_7k6v-a1-m4-cNB, 7k6v-a1-m4-cNA_7k6v-a1-m4-cOA
16 7k6v-a1-m4-cKA 499 36 0.1489 0.0281 0.3889 9.0 7k6v-a1-m4-cKA_7k6v-a1-m4-cKC
17 6ouu-a1-m9-cD 485 36 0.1489 0.0289 0.3889 9.7 6ouu-a1-m24-cC_6ouu-a1-m9-cD, 6ouu-a1-m54-cD_6ouu-a1-m9-cD, 6ouu-a1-m9-cC_6ouu-a1-m9-cD
18 6ouu-a1-m9-cC 485 36 0.1489 0.0289 0.3889 9.7 6ouu-a1-m9-cA_6ouu-a1-m9-cC, 6ouu-a1-m9-cC_6ouu-a1-m9-cD
19 6ouu-a1-m9-cA 485 36 0.1489 0.0289 0.3889 9.7 6ouu-a1-m9-cA_6ouu-a1-m9-cC
20 6ouu-a1-m54-cD 485 36 0.1489 0.0289 0.3889 9.7 6ouu-a1-m54-cD_6ouu-a1-m9-cD
21 6ouu-a1-m24-cC 485 36 0.1489 0.0289 0.3889 9.7 6ouu-a1-m24-cC_6ouu-a1-m9-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600