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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
MLYRVELIITNKEGVRDPEGETIQRYVVSRFSDKIIETRAGKYLVFRVNSSSQQEATELV
KKLADEMRLYNPIVHKIEIRANRIE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2zw2-a1-m1-cB 85 85 1.0000 1.0000 1.0000 8.86e-58 2zw2-a1-m1-cA_2zw2-a1-m1-cB
2 2zw2-a1-m1-cA 85 85 1.0000 1.0000 1.0000 8.86e-58 2zw2-a1-m1-cA_2zw2-a1-m1-cB
3 3d54-a3-m1-cC 82 79 0.3059 0.3171 0.3291 9.95e-09 3d54-a3-m1-cB_3d54-a3-m1-cC
4 3d54-a3-m1-cB 82 79 0.3059 0.3171 0.3291 9.95e-09 3d54-a3-m1-cB_3d54-a3-m1-cC
5 1vq3-a1-m1-cD 84 79 0.3059 0.3095 0.3291 1.05e-08 1vq3-a1-m1-cD_1vq3-a1-m1-cA
6 1vq3-a1-m1-cA 86 79 0.3059 0.3023 0.3291 1.20e-08 1vq3-a1-m1-cD_1vq3-a1-m1-cA
7 2yx5-a1-m4-cA 82 87 0.3294 0.3415 0.3218 1.16e-04 2yx5-a1-m1-cA_2yx5-a1-m4-cA, 2yx5-a1-m2-cA_2yx5-a1-m4-cA, 2yx5-a1-m3-cA_2yx5-a1-m4-cA
8 2yx5-a1-m3-cA 82 87 0.3294 0.3415 0.3218 1.16e-04 2yx5-a1-m3-cA_2yx5-a1-m4-cA
9 2yx5-a1-m2-cA 82 87 0.3294 0.3415 0.3218 1.16e-04 2yx5-a1-m2-cA_2yx5-a1-m4-cA
10 2yx5-a1-m1-cA 82 87 0.3294 0.3415 0.3218 1.16e-04 2yx5-a1-m1-cA_2yx5-a1-m4-cA
11 1twj-a1-m1-cD 80 73 0.2353 0.2500 0.2740 1.28e-04 1twj-a1-m1-cA_1twj-a1-m1-cD
12 1twj-a1-m1-cA 80 73 0.2353 0.2500 0.2740 1.28e-04 1twj-a1-m1-cA_1twj-a1-m1-cD
13 1t4a-a1-m2-cB 76 41 0.1647 0.1842 0.3415 0.022 1t4a-a1-m1-cB_1t4a-a1-m2-cB, 1t4a-a1-m2-cA_1t4a-a1-m2-cB
14 1t4a-a1-m2-cA 76 41 0.1647 0.1842 0.3415 0.022 1t4a-a1-m1-cA_1t4a-a1-m2-cA, 1t4a-a1-m2-cA_1t4a-a1-m2-cB
15 1t4a-a1-m1-cB 76 41 0.1647 0.1842 0.3415 0.022 1t4a-a1-m1-cB_1t4a-a1-m2-cB
16 1t4a-a1-m1-cA 76 41 0.1647 0.1842 0.3415 0.022 1t4a-a1-m1-cA_1t4a-a1-m2-cA
17 2dgb-a1-m1-cD 81 71 0.2588 0.2716 0.3099 0.030 2dgb-a1-m1-cA_2dgb-a1-m1-cD
18 2dgb-a1-m1-cA 81 71 0.2588 0.2716 0.3099 0.030 2dgb-a1-m1-cA_2dgb-a1-m1-cD
19 6b9r-a2-m1-cB 442 39 0.1529 0.0294 0.3333 4.3 6b9r-a2-m1-cB_6b9r-a2-m1-cC
20 6b9r-a2-m1-cC 446 39 0.1529 0.0291 0.3333 4.3 6b9r-a2-m1-cB_6b9r-a2-m1-cC
21 5ta0-a3-m1-cA 626 33 0.1529 0.0208 0.3939 4.9 5ta0-a3-m2-cB_5ta0-a3-m1-cA
22 5ta0-a3-m2-cB 615 33 0.1529 0.0211 0.3939 5.2 5ta0-a3-m2-cB_5ta0-a3-m1-cA
23 3h8g-a1-m1-cF 497 36 0.1412 0.0241 0.3333 7.6 3h8g-a1-m1-cA_3h8g-a1-m1-cF, 3h8g-a1-m1-cB_3h8g-a1-m1-cF, 3h8g-a1-m1-cD_3h8g-a1-m1-cF
24 3h8g-a1-m1-cD 497 36 0.1412 0.0241 0.3333 7.6 3h8g-a1-m1-cD_3h8g-a1-m1-cF
25 3h8g-a1-m1-cB 497 36 0.1412 0.0241 0.3333 7.6 3h8g-a1-m1-cB_3h8g-a1-m1-cF
26 3h8g-a1-m1-cA 497 36 0.1412 0.0241 0.3333 7.6 3h8g-a1-m1-cA_3h8g-a1-m1-cF
27 7p9k-a1-m1-cB 580 52 0.1765 0.0259 0.2885 8.8 7p9k-a1-m1-cA_7p9k-a1-m1-cB
28 7p9k-a1-m1-cA 580 52 0.1765 0.0259 0.2885 8.8 7p9k-a1-m1-cA_7p9k-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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