HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=98)
MMCPKMESAFSLLGKRWNGLIIHVLMDGPKRFKEITETIPMISQKMLAERLKELEQNEIV
ERQVLPETPVKVIYTLTEKGTALQAVFQEMQAWADQFC

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	5hs7-a1-m1-cB	98	98	1.0000	1.0000	1.0000	9.70e-70	5hs7-a1-m1-cB_5hs7-a1-m1-cA
2	5hs7-a1-m1-cA	102	98	1.0000	0.9608	1.0000	1.80e-69	5hs7-a1-m1-cB_5hs7-a1-m1-cA
3	5hs8-a1-m2-cA	101	98	1.0000	0.9703	1.0000	1.89e-69	5hs8-a1-m1-cA_5hs8-a1-m2-cA
4	5hs8-a1-m1-cA	101	98	1.0000	0.9703	1.0000	1.89e-69	5hs8-a1-m1-cA_5hs8-a1-m2-cA
5	4hqe-a1-m1-cA	105	99	0.3980	0.3714	0.3939	5.12e-23	4hqe-a1-m1-cA_4hqe-a1-m1-cB
6	4hqe-a1-m1-cB	108	99	0.3980	0.3611	0.3939	5.55e-23	4hqe-a1-m1-cA_4hqe-a1-m1-cB
7	4a5m-a3-m1-cE	96	93	0.3673	0.3750	0.3871	2.11e-20	4a5m-a3-m1-cE_4a5m-a3-m1-cF
8	4a5m-a3-m1-cF	97	93	0.3673	0.3711	0.3871	2.12e-20	4a5m-a3-m1-cE_4a5m-a3-m1-cF
9	7bzg-a3-m1-cJ	110	96	0.3980	0.3545	0.4062	1.83e-18	7bzg-a3-m1-cI_7bzg-a3-m1-cJ
10	7bzg-a3-m1-cI	110	96	0.3980	0.3545	0.4062	1.83e-18	7bzg-a3-m1-cI_7bzg-a3-m1-cJ
11	7bze-a1-m2-cA	108	92	0.3776	0.3426	0.4022	2.09e-18	7bze-a1-m1-cA_7bze-a1-m2-cA
12	7bze-a1-m1-cA	108	92	0.3776	0.3426	0.4022	2.09e-18	7bze-a1-m1-cA_7bze-a1-m2-cA
13	3df8-a1-m2-cA	105	82	0.3367	0.3143	0.4024	4.79e-10	3df8-a1-m1-cA_3df8-a1-m2-cA
14	3df8-a1-m1-cA	105	82	0.3367	0.3143	0.4024	4.79e-10	3df8-a1-m1-cA_3df8-a1-m2-cA
15	1z7u-a1-m1-cA	107	90	0.3061	0.2804	0.3333	3.57e-09	1z7u-a1-m1-cB_1z7u-a1-m1-cA
16	1z7u-a1-m1-cB	106	90	0.3061	0.2830	0.3333	3.58e-09	1z7u-a1-m1-cB_1z7u-a1-m1-cA
17	2fsw-a1-m1-cA	99	95	0.2755	0.2727	0.2842	4.39e-06	2fsw-a1-m1-cA_2fsw-a1-m1-cB
18	2fsw-a1-m1-cB	100	95	0.2755	0.2700	0.2842	5.03e-06	2fsw-a1-m1-cA_2fsw-a1-m1-cB
19	1yyv-a1-m1-cA	109	84	0.2857	0.2569	0.3333	1.83e-05	1yyv-a1-m1-cB_1yyv-a1-m1-cA
20	1yyv-a1-m1-cB	107	84	0.2857	0.2617	0.3333	1.88e-05	1yyv-a1-m1-cB_1yyv-a1-m1-cA
21	2f2e-a3-m3-cB	138	95	0.2653	0.1884	0.2737	6.12e-05	2f2e-a3-m1-cB_2f2e-a3-m3-cB, 2f2e-a3-m3-cB_2f2e-a3-m3-cA
22	2f2e-a3-m1-cB	138	95	0.2653	0.1884	0.2737	6.12e-05	2f2e-a3-m1-cB_2f2e-a3-m3-cB
23	2f2e-a2-m2-cB	138	95	0.2653	0.1884	0.2737	6.12e-05	2f2e-a2-m1-cB_2f2e-a2-m2-cB
24	2f2e-a2-m1-cB	138	95	0.2653	0.1884	0.2737	6.12e-05	2f2e-a2-m1-cB_2f2e-a2-m2-cB
25	2f2e-a3-m3-cA	140	95	0.2653	0.1857	0.2737	6.66e-05	2f2e-a3-m3-cB_2f2e-a3-m3-cA
26	3be5-a1-m1-cB	289	34	0.1429	0.0484	0.4118	0.90	3be5-a1-m1-cA_3be5-a1-m1-cB
27	3be5-a1-m1-cA	289	34	0.1429	0.0484	0.4118	0.90	3be5-a1-m1-cA_3be5-a1-m1-cB
28	4g22-a3-m1-cA	417	50	0.1633	0.0384	0.3200	3.0	4g22-a3-m2-cB_4g22-a3-m1-cA
29	3bpv-a1-m2-cA	137	43	0.1224	0.0876	0.2791	5.3	3bpv-a1-m1-cA_3bpv-a1-m2-cA
30	3bpv-a1-m1-cA	137	43	0.1224	0.0876	0.2791	5.3	3bpv-a1-m1-cA_3bpv-a1-m2-cA
31	6dqx-a1-m2-cA	520	69	0.1837	0.0346	0.2609	6.4	6dqx-a1-m1-cA_6dqx-a1-m2-cA
32	6dqx-a1-m1-cA	520	69	0.1837	0.0346	0.2609	6.4	6dqx-a1-m1-cA_6dqx-a1-m2-cA
33	4eru-a1-m1-cA	156	49	0.1429	0.0897	0.2857	8.3	4eru-a1-m1-cB_4eru-a1-m1-cA
34	4eru-a1-m1-cB	155	49	0.1429	0.0903	0.2857	8.7	4eru-a1-m1-cB_4eru-a1-m1-cA

[Back]

Reference:
Jacob Schwartz et al.