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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
MMVLVSYDVSTPGGDKRLRKVAKACRDLGQRVQFSVFEIEVDPAQWTALRQRLCDLIDPD
IDSLRFYHLGAKWEARVEHVGAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5h1o-a1-m1-cB 83 83 1.0000 1.0000 1.0000 3.84e-58 5h1o-a1-m1-cB_5h1o-a1-m1-cA
2 5h1o-a1-m1-cA 86 85 1.0000 0.9651 0.9765 3.88e-56 5h1o-a1-m1-cB_5h1o-a1-m1-cA
3 3oq2-a3-m3-cA 99 85 0.6506 0.5455 0.6353 1.04e-34 3oq2-a3-m3-cA_3oq2-a3-m4-cB
4 3oq2-a3-m1-cA 99 85 0.6506 0.5455 0.6353 1.04e-34 3oq2-a3-m1-cA_3oq2-a3-m4-cB
5 3oq2-a2-m2-cA 99 85 0.6506 0.5455 0.6353 1.04e-34 3oq2-a2-m2-cA_3oq2-a2-m2-cB
6 3oq2-a3-m4-cB 102 85 0.6506 0.5294 0.6353 1.09e-34 3oq2-a3-m1-cA_3oq2-a3-m4-cB, 3oq2-a3-m3-cA_3oq2-a3-m4-cB
7 3oq2-a2-m2-cB 102 85 0.6506 0.5294 0.6353 1.09e-34 3oq2-a2-m2-cA_3oq2-a2-m2-cB
8 4es1-a1-m2-cA 95 85 0.6024 0.5263 0.5882 1.42e-30 4es1-a1-m1-cA_4es1-a1-m2-cA
9 4es1-a1-m1-cA 95 85 0.6024 0.5263 0.5882 1.42e-30 4es1-a1-m1-cA_4es1-a1-m2-cA
10 8d3q-a1-m1-cF 98 85 0.6024 0.5102 0.5882 2.08e-30 8d3q-a1-m1-cE_8d3q-a1-m1-cF
11 8d3q-a1-m1-cE 98 85 0.6024 0.5102 0.5882 2.08e-30 8d3q-a1-m1-cE_8d3q-a1-m1-cF
12 4qr2-a1-m1-cA 83 83 0.5783 0.5783 0.5783 4.73e-28 4qr2-a1-m1-cB_4qr2-a1-m1-cA
13 4qr2-a1-m1-cB 82 80 0.5663 0.5732 0.5875 3.13e-27 4qr2-a1-m1-cB_4qr2-a1-m1-cA
14 7f84-a1-m1-cB 89 83 0.4217 0.3933 0.4217 3.46e-17 7f84-a1-m1-cA_7f84-a1-m1-cB
15 7f84-a1-m1-cA 89 83 0.4217 0.3933 0.4217 3.46e-17 7f84-a1-m1-cA_7f84-a1-m1-cB
16 5g4d-a1-m2-cA 79 69 0.3373 0.3544 0.4058 1.32e-06 5g4d-a1-m1-cA_5g4d-a1-m2-cA
17 5g4d-a1-m1-cA 79 69 0.3373 0.3544 0.4058 1.32e-06 5g4d-a1-m1-cA_5g4d-a1-m2-cA
18 7ei1-a1-m1-cR 84 69 0.3253 0.3214 0.3913 8.97e-06 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
19 7ei1-a1-m1-cQ 84 69 0.3253 0.3214 0.3913 8.97e-06 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
20 7cr8-a6-m1-cF 93 83 0.3133 0.2796 0.3133 4.02e-04 7cr8-a6-m1-cE_7cr8-a6-m1-cF
21 7cr8-a6-m1-cE 93 83 0.3133 0.2796 0.3133 4.02e-04 7cr8-a6-m1-cE_7cr8-a6-m1-cF
22 7kfu-a1-m1-cB 96 71 0.2530 0.2188 0.2958 0.11 7kfu-a1-m1-cA_7kfu-a1-m1-cB
23 7kfu-a1-m1-cA 96 71 0.2530 0.2188 0.2958 0.11 7kfu-a1-m1-cA_7kfu-a1-m1-cB
24 1zpw-a2-m2-cX 82 34 0.1807 0.1829 0.4412 0.30 1zpw-a2-m1-cX_1zpw-a2-m2-cX
25 1zpw-a2-m1-cX 82 34 0.1807 0.1829 0.4412 0.30 1zpw-a2-m1-cX_1zpw-a2-m2-cX
26 2ywl-a1-m1-cB 178 62 0.2289 0.1067 0.3065 0.48 2ywl-a1-m1-cA_2ywl-a1-m1-cB
27 2ywl-a1-m1-cA 178 62 0.2289 0.1067 0.3065 0.48 2ywl-a1-m1-cA_2ywl-a1-m1-cB
28 2jgd-a1-m1-cB 807 42 0.1566 0.0161 0.3095 0.87 2jgd-a1-m1-cB_2jgd-a1-m1-cA
29 2jgd-a1-m1-cA 812 42 0.1566 0.0160 0.3095 0.87 2jgd-a1-m1-cB_2jgd-a1-m1-cA
30 5k3i-a1-m1-cB 657 23 0.1325 0.0167 0.4783 8.6 5k3i-a1-m1-cB_5k3i-a1-m1-cA
31 5k3i-a1-m1-cA 661 23 0.1325 0.0166 0.4783 8.6 5k3i-a1-m1-cB_5k3i-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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