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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIID
EKTDSIRFYLLGKNWQRRVETL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4qr2-a1-m1-cB 82 82 1.0000 1.0000 1.0000 3.03e-58 4qr2-a1-m1-cB_4qr2-a1-m1-cA
2 4qr2-a1-m1-cA 83 82 1.0000 0.9880 1.0000 3.56e-58 4qr2-a1-m1-cB_4qr2-a1-m1-cA
3 3oq2-a3-m4-cB 102 80 0.5488 0.4412 0.5625 2.24e-31 3oq2-a3-m1-cA_3oq2-a3-m4-cB, 3oq2-a3-m3-cA_3oq2-a3-m4-cB
4 3oq2-a2-m2-cB 102 80 0.5488 0.4412 0.5625 2.24e-31 3oq2-a2-m2-cA_3oq2-a2-m2-cB
5 3oq2-a3-m3-cA 99 80 0.5488 0.4545 0.5625 2.56e-31 3oq2-a3-m3-cA_3oq2-a3-m4-cB
6 3oq2-a3-m1-cA 99 80 0.5488 0.4545 0.5625 2.56e-31 3oq2-a3-m1-cA_3oq2-a3-m4-cB
7 3oq2-a2-m2-cA 99 80 0.5488 0.4545 0.5625 2.56e-31 3oq2-a2-m2-cA_3oq2-a2-m2-cB
8 5h1o-a1-m1-cA 86 80 0.5732 0.5465 0.5875 1.48e-29 5h1o-a1-m1-cB_5h1o-a1-m1-cA
9 4es1-a1-m2-cA 95 80 0.5488 0.4737 0.5625 1.48e-28 4es1-a1-m1-cA_4es1-a1-m2-cA
10 4es1-a1-m1-cA 95 80 0.5488 0.4737 0.5625 1.48e-28 4es1-a1-m1-cA_4es1-a1-m2-cA
11 8d3q-a1-m1-cF 98 80 0.5488 0.4592 0.5625 1.61e-28 8d3q-a1-m1-cE_8d3q-a1-m1-cF
12 8d3q-a1-m1-cE 98 80 0.5488 0.4592 0.5625 1.61e-28 8d3q-a1-m1-cE_8d3q-a1-m1-cF
13 5h1o-a1-m1-cB 83 80 0.5732 0.5663 0.5875 3.10e-27 5h1o-a1-m1-cB_5h1o-a1-m1-cA
14 7f84-a1-m1-cB 89 71 0.4512 0.4157 0.5211 2.25e-22 7f84-a1-m1-cA_7f84-a1-m1-cB
15 7f84-a1-m1-cA 89 71 0.4512 0.4157 0.5211 2.25e-22 7f84-a1-m1-cA_7f84-a1-m1-cB
16 7ei1-a1-m1-cR 84 71 0.3902 0.3810 0.4507 6.03e-10 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
17 7ei1-a1-m1-cQ 84 71 0.3902 0.3810 0.4507 6.03e-10 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
18 5g4d-a1-m2-cA 79 79 0.4024 0.4177 0.4177 1.56e-08 5g4d-a1-m1-cA_5g4d-a1-m2-cA
19 5g4d-a1-m1-cA 79 79 0.4024 0.4177 0.4177 1.56e-08 5g4d-a1-m1-cA_5g4d-a1-m2-cA
20 7cr8-a6-m1-cF 93 81 0.3293 0.2903 0.3333 8.79e-08 7cr8-a6-m1-cE_7cr8-a6-m1-cF
21 7cr8-a6-m1-cE 93 81 0.3293 0.2903 0.3333 8.79e-08 7cr8-a6-m1-cE_7cr8-a6-m1-cF
22 6k2e-a1-m1-cA 88 80 0.3780 0.3523 0.3875 2.26e-07 6k2e-a1-m1-cB_6k2e-a1-m1-cA
23 6k2e-a1-m1-cB 87 80 0.3780 0.3563 0.3875 2.49e-07 6k2e-a1-m1-cB_6k2e-a1-m1-cA
24 7kfu-a1-m1-cB 96 75 0.3049 0.2604 0.3333 9.33e-05 7kfu-a1-m1-cA_7kfu-a1-m1-cB
25 7kfu-a1-m1-cA 96 75 0.3049 0.2604 0.3333 9.33e-05 7kfu-a1-m1-cA_7kfu-a1-m1-cB
26 1zpw-a2-m2-cX 82 37 0.2073 0.2073 0.4595 0.033 1zpw-a2-m1-cX_1zpw-a2-m2-cX
27 1zpw-a2-m1-cX 82 37 0.2073 0.2073 0.4595 0.033 1zpw-a2-m1-cX_1zpw-a2-m2-cX
28 3no5-a3-m1-cF 263 33 0.1585 0.0494 0.3939 0.35 3no5-a3-m1-cF_3no5-a3-m1-cE
29 3no5-a3-m1-cE 264 33 0.1585 0.0492 0.3939 0.35 3no5-a3-m1-cF_3no5-a3-m1-cE
30 1o6i-a1-m1-cA 496 59 0.2317 0.0383 0.3220 4.0 1o6i-a1-m1-cA_1o6i-a1-m1-cB
31 1o6i-a1-m1-cB 497 59 0.2317 0.0382 0.3220 4.0 1o6i-a1-m1-cA_1o6i-a1-m1-cB
32 5a99-a1-m3-cA 247 36 0.1829 0.0607 0.4167 4.3 5a99-a1-m2-cA_5a99-a1-m3-cA
33 5a99-a1-m2-cA 247 36 0.1829 0.0607 0.4167 4.3 5a99-a1-m2-cA_5a99-a1-m3-cA
34 4uc0-a1-m3-cA 235 30 0.1341 0.0468 0.3667 5.4 4uc0-a1-m2-cA_4uc0-a1-m3-cA
35 4uc0-a1-m2-cA 235 30 0.1341 0.0468 0.3667 5.4 4uc0-a1-m2-cA_4uc0-a1-m3-cA
36 2wuq-a1-m1-cA 277 40 0.1585 0.0469 0.3250 6.5 2wuq-a1-m1-cA_2wuq-a1-m1-cB
37 2wuq-a1-m1-cB 283 40 0.1585 0.0459 0.3250 6.7 2wuq-a1-m1-cA_2wuq-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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