Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=64)
MNAIDIAINKLGSVSALAASLGVRQSAISNWRARGRVPAERCIDIERVTNGAVICRELRP
DVFG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bd1-a2-m1-cA 65 64 1.0000 0.9846 1.0000 7.54e-41 3bd1-a2-m1-cB_3bd1-a2-m1-cA, 3bd1-a2-m1-cC_3bd1-a2-m1-cA
2 3bd1-a2-m1-cC 64 64 1.0000 1.0000 1.0000 8.28e-41 3bd1-a2-m1-cC_3bd1-a2-m1-cA
3 3bd1-a2-m1-cB 63 63 0.9844 1.0000 1.0000 6.02e-40 3bd1-a2-m1-cB_3bd1-a2-m1-cA
4 2pij-a1-m1-cA 57 53 0.3750 0.4211 0.4528 2.17e-05 2pij-a1-m1-cA_2pij-a1-m1-cB
5 2pij-a1-m1-cB 58 53 0.3750 0.4138 0.4528 2.22e-05 2pij-a1-m1-cA_2pij-a1-m1-cB
6 2hin-a1-m1-cA 66 39 0.2031 0.1970 0.3333 0.080 2hin-a1-m1-cB_2hin-a1-m1-cA
7 2hin-a1-m1-cB 64 39 0.2031 0.2031 0.3333 0.083 2hin-a1-m1-cB_2hin-a1-m1-cA
8 6juy-a1-m1-cC 656 54 0.2344 0.0229 0.2778 4.7 6juy-a1-m1-cD_6juy-a1-m1-cC
9 6j0e-a1-m1-cB 125 51 0.2188 0.1120 0.2745 5.2 6j0e-a1-m1-cA_6j0e-a1-m1-cB
10 6j0e-a1-m1-cA 124 51 0.2188 0.1129 0.2745 5.4 6j0e-a1-m1-cA_6j0e-a1-m1-cB
11 6juy-a1-m1-cD 623 55 0.2344 0.0241 0.2727 5.5 6juy-a1-m1-cD_6juy-a1-m1-cA, 6juy-a1-m1-cD_6juy-a1-m1-cB, 6juy-a1-m1-cD_6juy-a1-m1-cC
12 6juy-a1-m1-cB 637 55 0.2344 0.0235 0.2727 5.5 6juy-a1-m1-cD_6juy-a1-m1-cB
13 6juy-a1-m1-cA 639 55 0.2344 0.0235 0.2727 5.5 6juy-a1-m1-cD_6juy-a1-m1-cA
14 2e7p-a1-m1-cD 101 14 0.1250 0.0792 0.5714 6.2 2e7p-a1-m1-cD_2e7p-a1-m1-cA, 2e7p-a1-m1-cD_2e7p-a1-m1-cC
15 2e7p-a1-m1-cC 115 14 0.1250 0.0696 0.5714 6.4 2e7p-a1-m1-cD_2e7p-a1-m1-cC
16 2e7p-a1-m1-cA 107 14 0.1250 0.0748 0.5714 6.7 2e7p-a1-m1-cD_2e7p-a1-m1-cA
17 4ir8-a1-m1-cB 324 56 0.2969 0.0586 0.3393 9.7 4ir8-a1-m1-cA_4ir8-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600