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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
MNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKLRKTTE
EN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xfr-a1-m1-cB 69 62 1.0000 0.8986 1.0000 6.18e-39 7xfr-a1-m2-cD_7xfr-a1-m1-cB
2 7xfr-a1-m2-cD 62 62 1.0000 1.0000 1.0000 1.17e-38 7xfr-a1-m2-cD_7xfr-a1-m1-cB
3 6zay-a1-m1-cD 86 47 0.6935 0.5000 0.9149 1.38e-22 6zay-a1-m1-cC_6zay-a1-m1-cD
4 6zay-a1-m1-cC 86 47 0.6935 0.5000 0.9149 1.38e-22 6zay-a1-m1-cC_6zay-a1-m1-cD
5 6sur-a3-m1-cM 50 29 0.4516 0.5600 0.9655 4.71e-13 6sur-a3-m1-cN_6sur-a3-m1-cM
6 6sur-a3-m1-cN 49 28 0.4355 0.5510 0.9643 3.91e-12 6sur-a3-m1-cN_6sur-a3-m1-cM
7 2jee-a2-m1-cD 78 67 0.3065 0.2436 0.2836 0.93 2jee-a2-m1-cC_2jee-a2-m1-cD
8 2jee-a2-m1-cC 78 67 0.3065 0.2436 0.2836 0.93 2jee-a2-m1-cC_2jee-a2-m1-cD
9 3u9s-a1-m1-cK 497 52 0.2258 0.0282 0.2692 7.7 3u9s-a1-m1-cK_3u9s-a1-m1-cI
10 3u9s-a1-m1-cI 498 52 0.2258 0.0281 0.2692 8.1 3u9s-a1-m1-cK_3u9s-a1-m1-cI

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Reference:
Jacob Schwartz et al.

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