Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MNERLKEKLAVLPEQPGCYLMKDKHGTVIYVGKAKSLKERVRSYFTGTHDGKTQRLVEEI
ADFEYIVTSSNAEALILEMNLIKKHDPKYNVMLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1yd6-a2-m2-cC 94 94 1.0000 1.0000 1.0000 1.03e-66 1yd6-a2-m2-cC_1yd6-a2-m1-cA
2 1yd6-a2-m1-cC 94 94 1.0000 1.0000 1.0000 1.03e-66 1yd6-a2-m1-cC_1yd6-a2-m2-cD
3 1yd6-a2-m2-cA 95 94 1.0000 0.9895 1.0000 1.13e-66 1yd6-a2-m2-cA_1yd6-a2-m2-cD
4 1yd6-a2-m1-cA 95 94 1.0000 0.9895 1.0000 1.13e-66 1yd6-a2-m2-cC_1yd6-a2-m1-cA
5 1yd6-a2-m2-cD 96 93 0.9894 0.9688 1.0000 7.40e-66 1yd6-a2-m1-cC_1yd6-a2-m2-cD, 1yd6-a2-m2-cA_1yd6-a2-m2-cD
6 1yd6-a2-m2-cB 88 87 0.9255 0.9886 1.0000 2.69e-61 1yd6-a2-m1-cB_1yd6-a2-m2-cB
7 1yd6-a2-m1-cB 88 87 0.9255 0.9886 1.0000 2.69e-61 1yd6-a2-m1-cB_1yd6-a2-m2-cB
8 2gw1-a1-m1-cB 487 45 0.2021 0.0390 0.4222 2.2 2gw1-a1-m1-cA_2gw1-a1-m1-cB
9 2gw1-a1-m1-cA 487 45 0.2021 0.0390 0.4222 2.2 2gw1-a1-m1-cA_2gw1-a1-m1-cB
10 2wsh-a1-m1-cC 126 27 0.0957 0.0714 0.3333 7.3 2wsh-a1-m1-cC_2wsh-a1-m1-cD
11 7epq-a1-m1-cA 296 69 0.1702 0.0541 0.2319 8.7 7epq-a1-m1-cB_7epq-a1-m1-cA
12 7epq-a1-m1-cB 292 69 0.1702 0.0548 0.2319 9.0 7epq-a1-m1-cB_7epq-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600