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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=36)
MNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n3b-a1-m1-cI 36 36 1.0000 1.0000 1.0000 1.90e-18 6n3b-a1-m1-cA_6n3b-a1-m1-cI
2 6n3b-a1-m1-cA 36 36 1.0000 1.0000 1.0000 1.90e-18 6n3b-a1-m1-cA_6n3b-a1-m1-cI
3 7q3u-a1-m1-cC 71 36 1.0000 0.5070 1.0000 2.27e-18 7q3u-a1-m1-cA_7q3u-a1-m1-cC
4 7q3u-a1-m1-cA 71 36 1.0000 0.5070 1.0000 2.27e-18 7q3u-a1-m1-cA_7q3u-a1-m1-cC
5 6n3a-a1-m1-cJ 50 36 1.0000 0.7200 1.0000 3.50e-18 6n3a-a1-m1-cE_6n3a-a1-m1-cJ, 6n3a-a1-m1-cI_6n3a-a1-m1-cJ
6 6n3a-a1-m1-cI 50 36 1.0000 0.7200 1.0000 3.50e-18 6n3a-a1-m1-cI_6n3a-a1-m1-cJ
7 6n3a-a1-m1-cE 50 36 1.0000 0.7200 1.0000 3.50e-18 6n3a-a1-m1-cE_6n3a-a1-m1-cJ
8 7py2-a1-m1-cD 79 36 1.0000 0.4557 1.0000 3.62e-18 7py2-a1-m1-cC_7py2-a1-m1-cD
9 7py2-a1-m1-cC 79 36 1.0000 0.4557 1.0000 3.62e-18 7py2-a1-m1-cC_7py2-a1-m1-cD
10 6n37-a1-m1-cJ 36 35 0.9722 0.9722 1.0000 7.19e-18 6n37-a1-m1-cF_6n37-a1-m1-cJ, 6n37-a1-m1-cH_6n37-a1-m1-cJ
11 6n37-a1-m1-cH 36 35 0.9722 0.9722 1.0000 7.19e-18 6n37-a1-m1-cH_6n37-a1-m1-cJ
12 6n37-a1-m1-cF 36 35 0.9722 0.9722 1.0000 7.19e-18 6n37-a1-m1-cF_6n37-a1-m1-cJ
13 6n3b-a1-m1-cJ 41 35 0.9722 0.8537 1.0000 9.70e-18 6n3b-a1-m1-cB_6n3b-a1-m1-cJ
14 6n3b-a1-m1-cB 41 35 0.9722 0.8537 1.0000 9.70e-18 6n3b-a1-m1-cB_6n3b-a1-m1-cJ
15 7kwz-a1-m1-cE 139 36 1.0000 0.2590 1.0000 1.05e-17 7kwz-a1-m1-cD_7kwz-a1-m1-cE
16 7kwz-a1-m1-cD 139 36 1.0000 0.2590 1.0000 1.05e-17 7kwz-a1-m1-cD_7kwz-a1-m1-cE
17 7zsk-a1-m1-cC 1476 27 0.3056 0.0075 0.4074 1.7 7zsk-a1-m1-cB_7zsk-a1-m1-cC, 7zsk-a1-m1-cC_7zsk-a1-m1-cA, 7zsk-a1-m1-cC_7zsk-a1-m1-cD
18 7zsk-a1-m1-cB 1476 27 0.3056 0.0075 0.4074 1.7 7zsk-a1-m1-cB_7zsk-a1-m1-cA, 7zsk-a1-m1-cB_7zsk-a1-m1-cC
19 6ket-a1-m1-cA 348 16 0.2778 0.0287 0.6250 5.4 6ket-a1-m1-cB_6ket-a1-m1-cA
20 6ket-a1-m1-cB 332 16 0.2778 0.0301 0.6250 5.5 6ket-a1-m1-cB_6ket-a1-m1-cA
21 2pff-a1-m2-cH 2006 22 0.3056 0.0055 0.5000 6.3 2pff-a1-m2-cE_2pff-a1-m2-cH
22 2pff-a1-m2-cE 2006 22 0.3056 0.0055 0.5000 6.3 2pff-a1-m2-cE_2pff-a1-m2-cH
23 3fi7-a2-m4-cA 177 20 0.2778 0.0565 0.5000 6.6 3fi7-a2-m1-cA_3fi7-a2-m4-cA, 3fi7-a2-m3-cA_3fi7-a2-m4-cA
24 3fi7-a2-m3-cA 177 20 0.2778 0.0565 0.5000 6.6 3fi7-a2-m3-cA_3fi7-a2-m4-cA
25 3fi7-a2-m1-cA 177 20 0.2778 0.0565 0.5000 6.6 3fi7-a2-m1-cA_3fi7-a2-m4-cA

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Reference:
Jacob Schwartz et al.

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