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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
MNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n3a-a1-m1-cJ 50 50 1.0000 1.0000 1.0000 7.92e-28 6n3a-a1-m1-cE_6n3a-a1-m1-cJ, 6n3a-a1-m1-cI_6n3a-a1-m1-cJ
2 6n3a-a1-m1-cI 50 50 1.0000 1.0000 1.0000 7.92e-28 6n3a-a1-m1-cI_6n3a-a1-m1-cJ
3 6n3a-a1-m1-cE 50 50 1.0000 1.0000 1.0000 7.92e-28 6n3a-a1-m1-cE_6n3a-a1-m1-cJ
4 7py2-a1-m1-cD 79 50 1.0000 0.6329 1.0000 1.75e-27 7py2-a1-m1-cC_7py2-a1-m1-cD
5 7py2-a1-m1-cC 79 50 1.0000 0.6329 1.0000 1.75e-27 7py2-a1-m1-cC_7py2-a1-m1-cD
6 7kwz-a1-m1-cE 139 50 1.0000 0.3597 1.0000 4.69e-27 7kwz-a1-m1-cD_7kwz-a1-m1-cE
7 7kwz-a1-m1-cD 139 50 1.0000 0.3597 1.0000 4.69e-27 7kwz-a1-m1-cD_7kwz-a1-m1-cE
8 6n3b-a1-m1-cJ 41 41 0.8200 1.0000 1.0000 1.53e-15 6n3b-a1-m1-cB_6n3b-a1-m1-cJ
9 6n3b-a1-m1-cB 41 41 0.8200 1.0000 1.0000 1.53e-15 6n3b-a1-m1-cB_6n3b-a1-m1-cJ
10 7q3u-a1-m1-cC 71 41 0.8200 0.5775 1.0000 5.09e-15 7q3u-a1-m1-cA_7q3u-a1-m1-cC
11 7q3u-a1-m1-cA 71 41 0.8200 0.5775 1.0000 5.09e-15 7q3u-a1-m1-cA_7q3u-a1-m1-cC
12 6n3b-a1-m1-cI 36 36 0.7200 1.0000 1.0000 7.50e-12 6n3b-a1-m1-cA_6n3b-a1-m1-cI
13 6n3b-a1-m1-cA 36 36 0.7200 1.0000 1.0000 7.50e-12 6n3b-a1-m1-cA_6n3b-a1-m1-cI
14 6n37-a1-m1-cJ 36 36 0.7200 1.0000 1.0000 9.35e-12 6n37-a1-m1-cF_6n37-a1-m1-cJ, 6n37-a1-m1-cH_6n37-a1-m1-cJ
15 6n37-a1-m1-cH 36 36 0.7200 1.0000 1.0000 9.35e-12 6n37-a1-m1-cH_6n37-a1-m1-cJ
16 6n37-a1-m1-cF 36 36 0.7200 1.0000 1.0000 9.35e-12 6n37-a1-m1-cF_6n37-a1-m1-cJ
17 5a0u-a5-m2-cE 793 24 0.2000 0.0126 0.4167 4.5 5a0u-a5-m1-cF_5a0u-a5-m2-cE
18 5a0u-a5-m1-cF 793 24 0.2000 0.0126 0.4167 4.5 5a0u-a5-m1-cF_5a0u-a5-m2-cE

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Reference:
Jacob Schwartz et al.

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