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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
MNIQITFTDSVRQGTSAKGNPYTFQEGFLHLEDKPHPLQCQFFVESVIPAGSYQVPYRIN
VNNGRPELAFDFKAMKRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pfs-a1-m1-cB 78 78 1.0000 1.0000 1.0000 1.12e-55 1pfs-a1-m1-cA_1pfs-a1-m1-cB
2 1pfs-a1-m1-cA 78 78 1.0000 1.0000 1.0000 1.12e-55 1pfs-a1-m1-cA_1pfs-a1-m1-cB
3 2i7n-a1-m1-cA 325 59 0.2436 0.0585 0.3220 1.8 2i7n-a1-m1-cA_2i7n-a1-m1-cB
4 2ols-a2-m2-cA 725 19 0.1154 0.0124 0.4737 4.9 2ols-a2-m1-cA_2ols-a2-m2-cA
5 2ols-a2-m1-cA 725 19 0.1154 0.0124 0.4737 4.9 2ols-a2-m1-cA_2ols-a2-m2-cA
6 4bei-a1-m1-cG 233 28 0.1410 0.0472 0.3929 5.6 4bei-a1-m1-cG_4bei-a1-m1-cH
7 4bei-a1-m1-cH 234 28 0.1410 0.0470 0.3929 5.8 4bei-a1-m1-cG_4bei-a1-m1-cH
8 2i1n-a4-m3-cB 102 32 0.1410 0.1078 0.3438 7.3 2i1n-a4-m1-cA_2i1n-a4-m3-cB, 2i1n-a4-m1-cB_2i1n-a4-m3-cB, 2i1n-a4-m3-cA_2i1n-a4-m3-cB
9 2i1n-a4-m1-cB 102 32 0.1410 0.1078 0.3438 7.3 2i1n-a4-m1-cB_2i1n-a4-m3-cB
10 2i1n-a3-m2-cB 102 32 0.1410 0.1078 0.3438 7.3 2i1n-a3-m1-cA_2i1n-a3-m2-cB
11 2i1n-a4-m3-cA 101 32 0.1410 0.1089 0.3438 7.3 2i1n-a4-m3-cA_2i1n-a4-m3-cB
12 2i1n-a4-m1-cA 101 32 0.1410 0.1089 0.3438 7.3 2i1n-a4-m1-cA_2i1n-a4-m3-cB
13 2i1n-a3-m1-cA 101 32 0.1410 0.1089 0.3438 7.3 2i1n-a3-m1-cA_2i1n-a3-m2-cB

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Reference:
Jacob Schwartz et al.

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