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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVK
VGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pf9-a1-m1-cR 97 97 1.0000 1.0000 1.0000 6.19e-64 1pf9-a1-m1-cQ_1pf9-a1-m1-cR
2 1pf9-a1-m1-cQ 97 97 1.0000 1.0000 1.0000 6.19e-64 1pf9-a1-m1-cQ_1pf9-a1-m1-cR
3 1wnr-a1-m1-cC 84 94 0.4742 0.5476 0.4894 2.63e-21 1wnr-a1-m1-cD_1wnr-a1-m1-cC
4 1p3h-a3-m1-cM 99 96 0.4536 0.4444 0.4583 9.21e-21 1p3h-a3-m1-cD_1p3h-a3-m1-cM
5 1p3h-a3-m1-cH 99 96 0.4536 0.4444 0.4583 9.21e-21 1p3h-a3-m1-cC_1p3h-a3-m1-cH
6 1p3h-a3-m1-cD 99 96 0.4536 0.4444 0.4583 9.21e-21 1p3h-a3-m1-cD_1p3h-a3-m1-cM
7 1p3h-a3-m1-cK 98 96 0.4536 0.4490 0.4583 9.26e-21 1p3h-a3-m1-cJ_1p3h-a3-m1-cK
8 1p3h-a3-m1-cJ 98 96 0.4536 0.4490 0.4583 9.26e-21 1p3h-a3-m1-cJ_1p3h-a3-m1-cK
9 1p3h-a3-m1-cC 98 96 0.4536 0.4490 0.4583 9.26e-21 1p3h-a3-m1-cC_1p3h-a3-m1-cH
10 1wnr-a1-m1-cE 75 94 0.4227 0.5467 0.4362 1.31e-16 1wnr-a1-m1-cD_1wnr-a1-m1-cE
11 1wnr-a1-m1-cD 75 94 0.4227 0.5467 0.4362 1.31e-16 1wnr-a1-m1-cD_1wnr-a1-m1-cC, 1wnr-a1-m1-cD_1wnr-a1-m1-cE
12 7ekq-a1-m1-cS 194 95 0.3814 0.1907 0.3895 1.19e-12 7ekq-a1-m1-cR_7ekq-a1-m1-cS
13 7ekq-a1-m1-cS 194 95 0.2990 0.1495 0.3053 1.66e-07 7ekq-a1-m1-cR_7ekq-a1-m1-cS
14 7ekq-a1-m1-cR 194 95 0.3814 0.1907 0.3895 1.19e-12 7ekq-a1-m1-cR_7ekq-a1-m1-cS
15 7ekq-a1-m1-cR 194 95 0.2990 0.1495 0.3053 1.66e-07 7ekq-a1-m1-cR_7ekq-a1-m1-cS
16 1hx5-a1-m1-cC 82 94 0.3918 0.4634 0.4043 6.30e-12 1hx5-a1-m1-cB_1hx5-a1-m1-cC
17 1hx5-a1-m1-cB 82 94 0.3918 0.4634 0.4043 6.30e-12 1hx5-a1-m1-cB_1hx5-a1-m1-cC
18 1lep-a1-m1-cG 81 96 0.3711 0.4444 0.3750 1.65e-10 1lep-a1-m1-cF_1lep-a1-m1-cG
19 1lep-a1-m1-cF 81 96 0.3711 0.4444 0.3750 1.65e-10 1lep-a1-m1-cF_1lep-a1-m1-cG
20 7orx-a1-m1-cCCC 530 39 0.1546 0.0283 0.3846 1.1 7orx-a1-m1-cDDD_7orx-a1-m1-cCCC
21 7orx-a1-m1-cDDD 526 39 0.1546 0.0285 0.3846 1.1 7orx-a1-m1-cAAA_7orx-a1-m1-cDDD, 7orx-a1-m1-cBBB_7orx-a1-m1-cDDD, 7orx-a1-m1-cDDD_7orx-a1-m1-cCCC
22 7orx-a1-m1-cBBB 526 39 0.1546 0.0285 0.3846 1.1 7orx-a1-m1-cBBB_7orx-a1-m1-cDDD
23 7orx-a1-m1-cAAA 526 39 0.1546 0.0285 0.3846 1.1 7orx-a1-m1-cAAA_7orx-a1-m1-cDDD
24 5m45-a2-m1-cJ 762 41 0.1134 0.0144 0.2683 4.1 5m45-a2-m1-cG_5m45-a2-m1-cJ
25 5m45-a2-m1-cG 762 41 0.1134 0.0144 0.2683 4.1 5m45-a2-m1-cG_5m45-a2-m1-cJ

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Reference:
Jacob Schwartz et al.

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