Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
MNKKELIDRVAKKAGAKKKDVKLILDTILETITEALAKGEKVQIVGFGSFEVVPKFKPGK
ALKEKVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1b8z-a1-m1-cB 67 67 1.0000 1.0000 1.0000 3.81e-40 1b8z-a1-m1-cA_1b8z-a1-m1-cB
2 1b8z-a1-m1-cA 67 67 1.0000 1.0000 1.0000 3.81e-40 1b8z-a1-m1-cA_1b8z-a1-m1-cB
3 1huu-a4-m3-cB 74 74 0.6119 0.5541 0.5541 2.10e-21 1huu-a4-m1-cB_1huu-a4-m3-cB
4 1huu-a4-m1-cB 74 74 0.6119 0.5541 0.5541 2.10e-21 1huu-a4-m1-cB_1huu-a4-m3-cB
5 5eka-a1-m2-cA 85 79 0.5970 0.4706 0.5063 1.93e-19 5eka-a1-m1-cA_5eka-a1-m2-cA
6 5eka-a1-m1-cA 85 79 0.5970 0.4706 0.5063 1.93e-19 5eka-a1-m1-cA_5eka-a1-m2-cA
7 1hue-a1-m1-cB 90 90 0.6119 0.4556 0.4556 1.07e-18 1hue-a1-m1-cA_1hue-a1-m1-cB
8 1hue-a1-m1-cA 90 90 0.6119 0.4556 0.4556 1.07e-18 1hue-a1-m1-cA_1hue-a1-m1-cB
9 3rhi-a2-m1-cD 82 82 0.5672 0.4634 0.4634 6.46e-18 3rhi-a2-m1-cD_3rhi-a2-m1-cC
10 3rhi-a2-m1-cC 90 90 0.5672 0.4222 0.4222 2.02e-16 3rhi-a2-m1-cD_3rhi-a2-m1-cC
11 4qjn-a2-m1-cD 90 90 0.5672 0.4222 0.4222 1.76e-15 4qjn-a2-m1-cB_4qjn-a2-m1-cD
12 4qjn-a2-m1-cB 90 90 0.5672 0.4222 0.4222 1.76e-15 4qjn-a2-m1-cB_4qjn-a2-m1-cD
13 4p3v-a1-m2-cA 72 72 0.4776 0.4444 0.4444 8.68e-15 4p3v-a1-m1-cA_4p3v-a1-m2-cA
14 4p3v-a1-m1-cA 72 72 0.4776 0.4444 0.4444 8.68e-15 4p3v-a1-m1-cA_4p3v-a1-m2-cA
15 5fbm-a1-m1-cA 83 81 0.5224 0.4217 0.4321 1.82e-14 5fbm-a1-m1-cA_5fbm-a1-m1-cB
16 5lvt-a2-m1-cD 91 89 0.5821 0.4286 0.4382 2.06e-14 5lvt-a2-m1-cB_5lvt-a2-m1-cD
17 5lvt-a2-m1-cB 91 89 0.5821 0.4286 0.4382 2.06e-14 5lvt-a2-m1-cB_5lvt-a2-m1-cD
18 5fbm-a1-m1-cB 83 82 0.5224 0.4217 0.4268 2.92e-14 5fbm-a1-m1-cA_5fbm-a1-m1-cB
19 6n2l-a1-m2-cA 88 83 0.5373 0.4091 0.4337 3.68e-14 6n2l-a1-m1-cA_6n2l-a1-m2-cA
20 6n2l-a1-m1-cA 88 83 0.5373 0.4091 0.4337 3.68e-14 6n2l-a1-m1-cA_6n2l-a1-m2-cA
21 1p71-a1-m1-cB 93 89 0.5522 0.3978 0.4157 8.63e-14 1p71-a1-m1-cB_1p71-a1-m1-cA
22 1p71-a1-m1-cA 94 89 0.5522 0.3936 0.4157 8.65e-14 1p71-a1-m1-cB_1p71-a1-m1-cA
23 6o8q-a1-m1-cH 91 90 0.5373 0.3956 0.4000 1.16e-12 6o8q-a1-m1-cG_6o8q-a1-m1-cH
24 6o8q-a1-m1-cG 91 90 0.5373 0.3956 0.4000 1.16e-12 6o8q-a1-m1-cG_6o8q-a1-m1-cH
25 4dky-a1-m2-cA 97 90 0.4179 0.2887 0.3111 2.76e-09 4dky-a1-m1-cA_4dky-a1-m2-cA
26 4dky-a1-m1-cA 97 90 0.4179 0.2887 0.3111 2.76e-09 4dky-a1-m1-cA_4dky-a1-m2-cA
27 1exe-a1-m1-cB 99 47 0.3134 0.2121 0.4468 3.39e-06 1exe-a1-m1-cA_1exe-a1-m1-cB
28 1exe-a1-m1-cA 99 47 0.3134 0.2121 0.4468 3.39e-06 1exe-a1-m1-cA_1exe-a1-m1-cB
29 1wtu-a1-m1-cB 99 47 0.2836 0.1919 0.4043 3.81e-04 1wtu-a1-m1-cA_1wtu-a1-m1-cB
30 1wtu-a1-m1-cA 99 47 0.2836 0.1919 0.4043 3.81e-04 1wtu-a1-m1-cA_1wtu-a1-m1-cB
31 2np2-a1-m1-cB 102 93 0.3433 0.2255 0.2473 8.22e-04 2np2-a1-m1-cA_2np2-a1-m1-cB
32 2np2-a1-m1-cA 102 93 0.3433 0.2255 0.2473 8.22e-04 2np2-a1-m1-cA_2np2-a1-m1-cB
33 5l8z-a1-m2-cA 95 57 0.2985 0.2105 0.3509 0.010 5l8z-a1-m1-cA_5l8z-a1-m2-cA
34 5l8z-a1-m1-cA 95 57 0.2985 0.2105 0.3509 0.010 5l8z-a1-m1-cA_5l8z-a1-m2-cA
35 5gl5-a1-m1-cA 431 23 0.1791 0.0278 0.5217 3.6 5gl5-a1-m1-cA_5gl5-a1-m1-cB
36 5gl5-a1-m1-cB 431 23 0.1791 0.0278 0.5217 3.8 5gl5-a1-m1-cA_5gl5-a1-m1-cB
37 3e3m-a2-m1-cD 270 18 0.1493 0.0370 0.5556 5.0 3e3m-a2-m1-cC_3e3m-a2-m1-cD
38 3e3m-a2-m1-cC 270 18 0.1493 0.0370 0.5556 5.0 3e3m-a2-m1-cC_3e3m-a2-m1-cD
39 2ndp-a1-m1-cB 99 67 0.2239 0.1515 0.2239 6.3 2ndp-a1-m1-cA_2ndp-a1-m1-cB
40 2ndp-a1-m1-cA 99 67 0.2239 0.1515 0.2239 6.3 2ndp-a1-m1-cA_2ndp-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600