Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKG
RNPQTGKEIDIPASKVPAFKAGKALKDAVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4qjn-a2-m1-cD 90 90 1.0000 1.0000 1.0000 3.99e-60 4qjn-a2-m1-cB_4qjn-a2-m1-cD
2 4qjn-a2-m1-cB 90 90 1.0000 1.0000 1.0000 3.99e-60 4qjn-a2-m1-cB_4qjn-a2-m1-cD
3 1hue-a1-m1-cB 90 90 0.8000 0.8000 0.8000 6.63e-47 1hue-a1-m1-cA_1hue-a1-m1-cB
4 1hue-a1-m1-cA 90 90 0.8000 0.8000 0.8000 6.63e-47 1hue-a1-m1-cA_1hue-a1-m1-cB
5 3rhi-a2-m1-cC 90 90 0.7111 0.7111 0.7111 8.25e-41 3rhi-a2-m1-cD_3rhi-a2-m1-cC
6 5fbm-a1-m1-cB 83 89 0.7000 0.7590 0.7079 1.81e-35 5fbm-a1-m1-cA_5fbm-a1-m1-cB
7 5fbm-a1-m1-cA 83 89 0.7000 0.7590 0.7079 1.92e-35 5fbm-a1-m1-cA_5fbm-a1-m1-cB
8 5lvt-a2-m1-cD 91 89 0.6778 0.6703 0.6854 7.63e-35 5lvt-a2-m1-cB_5lvt-a2-m1-cD
9 5lvt-a2-m1-cB 91 89 0.6778 0.6703 0.6854 7.63e-35 5lvt-a2-m1-cB_5lvt-a2-m1-cD
10 6o8q-a1-m1-cH 91 90 0.5889 0.5824 0.5889 3.58e-33 6o8q-a1-m1-cG_6o8q-a1-m1-cH
11 6o8q-a1-m1-cG 91 90 0.5889 0.5824 0.5889 3.58e-33 6o8q-a1-m1-cG_6o8q-a1-m1-cH
12 3rhi-a2-m1-cD 82 90 0.6333 0.6951 0.6333 1.36e-31 3rhi-a2-m1-cD_3rhi-a2-m1-cC
13 1huu-a4-m3-cB 74 90 0.6556 0.7973 0.6556 2.88e-31 1huu-a4-m1-cB_1huu-a4-m3-cB
14 1huu-a4-m1-cB 74 90 0.6556 0.7973 0.6556 2.88e-31 1huu-a4-m1-cB_1huu-a4-m3-cB
15 1p71-a1-m1-cB 93 89 0.5111 0.4946 0.5169 7.77e-30 1p71-a1-m1-cB_1p71-a1-m1-cA
16 1p71-a1-m1-cA 94 89 0.5111 0.4894 0.5169 8.44e-30 1p71-a1-m1-cB_1p71-a1-m1-cA
17 5eka-a1-m2-cA 85 90 0.4778 0.5059 0.4778 2.89e-21 5eka-a1-m1-cA_5eka-a1-m2-cA
18 5eka-a1-m1-cA 85 90 0.4778 0.5059 0.4778 2.89e-21 5eka-a1-m1-cA_5eka-a1-m2-cA
19 6n2l-a1-m2-cA 88 89 0.4778 0.4886 0.4831 1.24e-20 6n2l-a1-m1-cA_6n2l-a1-m2-cA
20 6n2l-a1-m1-cA 88 89 0.4778 0.4886 0.4831 1.24e-20 6n2l-a1-m1-cA_6n2l-a1-m2-cA
21 5l8z-a1-m2-cA 95 88 0.4778 0.4526 0.4886 3.50e-20 5l8z-a1-m1-cA_5l8z-a1-m2-cA
22 5l8z-a1-m1-cA 95 88 0.4778 0.4526 0.4886 3.50e-20 5l8z-a1-m1-cA_5l8z-a1-m2-cA
23 4p3v-a1-m2-cA 72 89 0.4556 0.5694 0.4607 1.70e-19 4p3v-a1-m1-cA_4p3v-a1-m2-cA
24 4p3v-a1-m1-cA 72 89 0.4556 0.5694 0.4607 1.70e-19 4p3v-a1-m1-cA_4p3v-a1-m2-cA
25 1wtu-a1-m1-cB 99 89 0.4556 0.4141 0.4607 3.47e-15 1wtu-a1-m1-cA_1wtu-a1-m1-cB
26 1wtu-a1-m1-cA 99 89 0.4556 0.4141 0.4607 3.47e-15 1wtu-a1-m1-cA_1wtu-a1-m1-cB
27 1exe-a1-m1-cB 99 88 0.4111 0.3737 0.4205 7.93e-15 1exe-a1-m1-cA_1exe-a1-m1-cB
28 1exe-a1-m1-cA 99 88 0.4111 0.3737 0.4205 7.93e-15 1exe-a1-m1-cA_1exe-a1-m1-cB
29 4dky-a1-m2-cA 97 89 0.3889 0.3608 0.3933 3.43e-13 4dky-a1-m1-cA_4dky-a1-m2-cA
30 4dky-a1-m1-cA 97 89 0.3889 0.3608 0.3933 3.43e-13 4dky-a1-m1-cA_4dky-a1-m2-cA
31 2np2-a1-m1-cB 102 95 0.3556 0.3137 0.3368 4.90e-13 2np2-a1-m1-cA_2np2-a1-m1-cB
32 2np2-a1-m1-cA 102 95 0.3556 0.3137 0.3368 4.90e-13 2np2-a1-m1-cA_2np2-a1-m1-cB
33 1b8z-a1-m1-cB 67 90 0.4222 0.5672 0.4222 1.86e-12 1b8z-a1-m1-cA_1b8z-a1-m1-cB
34 1b8z-a1-m1-cA 67 90 0.4222 0.5672 0.4222 1.86e-12 1b8z-a1-m1-cA_1b8z-a1-m1-cB
35 2ndp-a1-m1-cB 99 70 0.3000 0.2727 0.3857 1.46e-05 2ndp-a1-m1-cA_2ndp-a1-m1-cB
36 2ndp-a1-m1-cA 99 70 0.3000 0.2727 0.3857 1.46e-05 2ndp-a1-m1-cA_2ndp-a1-m1-cB
37 6lmj-a1-m1-cB 98 99 0.3333 0.3061 0.3030 1.52e-04 6lmj-a1-m1-cB_6lmj-a1-m1-cA
38 6lmj-a1-m1-cA 99 99 0.3333 0.3030 0.3030 1.56e-04 6lmj-a1-m1-cB_6lmj-a1-m1-cA
39 3e3m-a2-m1-cD 270 22 0.1222 0.0407 0.5000 4.0 3e3m-a2-m1-cC_3e3m-a2-m1-cD
40 3e3m-a2-m1-cC 270 22 0.1222 0.0407 0.5000 4.0 3e3m-a2-m1-cC_3e3m-a2-m1-cD
41 2r3e-a1-m4-cA 269 43 0.1667 0.0558 0.3488 4.2 2r3e-a1-m2-cA_2r3e-a1-m4-cA
42 2r3e-a1-m2-cA 269 43 0.1667 0.0558 0.3488 4.2 2r3e-a1-m2-cA_2r3e-a1-m4-cA
43 3b9o-a3-m1-cB 433 25 0.1111 0.0231 0.4000 7.2 3b9o-a3-m1-cA_3b9o-a3-m1-cB
44 3b9o-a3-m1-cA 433 25 0.1111 0.0231 0.4000 7.2 3b9o-a3-m1-cA_3b9o-a3-m1-cB
45 7jw9-a1-m1-cD 378 49 0.1778 0.0423 0.3265 8.9 7jw9-a1-m1-cC_7jw9-a1-m1-cD
46 7jw9-a1-m1-cC 378 49 0.1778 0.0423 0.3265 8.9 7jw9-a1-m1-cA_7jw9-a1-m1-cC, 7jw9-a1-m1-cB_7jw9-a1-m1-cC, 7jw9-a1-m1-cC_7jw9-a1-m1-cD
47 7jw9-a1-m1-cB 378 49 0.1778 0.0423 0.3265 8.9 7jw9-a1-m1-cB_7jw9-a1-m1-cC
48 7jw9-a1-m1-cA 378 49 0.1778 0.0423 0.3265 8.9 7jw9-a1-m1-cA_7jw9-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600