Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
MNKTELIKAIAQDTELTQVSVSKMLASFEKITTETVAKGDKVQLTGFLNIKPVARQARKG
FNPQTQEALEIAPSVGVSVKPGESLKKAAEGLKYEDFAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wtu-a1-m1-cB 99 99 1.0000 1.0000 1.0000 1.23e-67 1wtu-a1-m1-cA_1wtu-a1-m1-cB
2 1wtu-a1-m1-cA 99 99 1.0000 1.0000 1.0000 1.23e-67 1wtu-a1-m1-cA_1wtu-a1-m1-cB
3 1exe-a1-m1-cB 99 99 0.9798 0.9798 0.9798 1.07e-65 1exe-a1-m1-cA_1exe-a1-m1-cB
4 1exe-a1-m1-cA 99 99 0.9798 0.9798 0.9798 1.07e-65 1exe-a1-m1-cA_1exe-a1-m1-cB
5 1hue-a1-m1-cB 90 89 0.4545 0.5000 0.5056 6.34e-19 1hue-a1-m1-cA_1hue-a1-m1-cB
6 1hue-a1-m1-cA 90 89 0.4545 0.5000 0.5056 6.34e-19 1hue-a1-m1-cA_1hue-a1-m1-cB
7 5lvt-a2-m1-cD 91 87 0.3939 0.4286 0.4483 1.69e-16 5lvt-a2-m1-cB_5lvt-a2-m1-cD
8 5lvt-a2-m1-cB 91 87 0.3939 0.4286 0.4483 1.69e-16 5lvt-a2-m1-cB_5lvt-a2-m1-cD
9 3rhi-a2-m1-cC 90 88 0.3939 0.4333 0.4432 3.19e-16 3rhi-a2-m1-cD_3rhi-a2-m1-cC
10 4qjn-a2-m1-cD 90 89 0.4141 0.4556 0.4607 3.82e-15 4qjn-a2-m1-cB_4qjn-a2-m1-cD
11 4qjn-a2-m1-cB 90 89 0.4141 0.4556 0.4607 3.82e-15 4qjn-a2-m1-cB_4qjn-a2-m1-cD
12 6o8q-a1-m1-cH 91 88 0.3535 0.3846 0.3977 8.61e-12 6o8q-a1-m1-cG_6o8q-a1-m1-cH
13 6o8q-a1-m1-cG 91 88 0.3535 0.3846 0.3977 8.61e-12 6o8q-a1-m1-cG_6o8q-a1-m1-cH
14 1p71-a1-m1-cA 94 71 0.2828 0.2979 0.3944 3.65e-11 1p71-a1-m1-cB_1p71-a1-m1-cA
15 1p71-a1-m1-cB 93 71 0.2828 0.3011 0.3944 3.73e-11 1p71-a1-m1-cB_1p71-a1-m1-cA
16 3rhi-a2-m1-cD 82 88 0.3333 0.4024 0.3750 1.05e-08 3rhi-a2-m1-cD_3rhi-a2-m1-cC
17 1huu-a4-m3-cB 74 66 0.3131 0.4189 0.4697 2.17e-08 1huu-a4-m1-cB_1huu-a4-m3-cB
18 1huu-a4-m1-cB 74 66 0.3131 0.4189 0.4697 2.17e-08 1huu-a4-m1-cB_1huu-a4-m3-cB
19 5fbm-a1-m1-cB 83 88 0.3434 0.4096 0.3864 2.00e-06 5fbm-a1-m1-cA_5fbm-a1-m1-cB
20 6n2l-a1-m2-cA 88 60 0.2323 0.2614 0.3833 2.83e-06 6n2l-a1-m1-cA_6n2l-a1-m2-cA
21 6n2l-a1-m1-cA 88 60 0.2323 0.2614 0.3833 2.83e-06 6n2l-a1-m1-cA_6n2l-a1-m2-cA
22 5fbm-a1-m1-cA 83 59 0.2626 0.3133 0.4407 1.22e-05 5fbm-a1-m1-cA_5fbm-a1-m1-cB
23 4dky-a1-m2-cA 97 91 0.2727 0.2784 0.2967 8.24e-05 4dky-a1-m1-cA_4dky-a1-m2-cA
24 4dky-a1-m1-cA 97 91 0.2727 0.2784 0.2967 8.24e-05 4dky-a1-m1-cA_4dky-a1-m2-cA
25 5eka-a1-m2-cA 85 86 0.2929 0.3412 0.3372 2.61e-04 5eka-a1-m1-cA_5eka-a1-m2-cA
26 5eka-a1-m1-cA 85 86 0.2929 0.3412 0.3372 2.61e-04 5eka-a1-m1-cA_5eka-a1-m2-cA
27 4p3v-a1-m2-cA 72 47 0.1616 0.2222 0.3404 7.07e-04 4p3v-a1-m1-cA_4p3v-a1-m2-cA
28 4p3v-a1-m1-cA 72 47 0.1616 0.2222 0.3404 7.07e-04 4p3v-a1-m1-cA_4p3v-a1-m2-cA
29 5l8z-a1-m2-cA 95 92 0.3333 0.3474 0.3587 7.79e-04 5l8z-a1-m1-cA_5l8z-a1-m2-cA
30 5l8z-a1-m1-cA 95 92 0.3333 0.3474 0.3587 7.79e-04 5l8z-a1-m1-cA_5l8z-a1-m2-cA
31 1b8z-a1-m1-cB 67 47 0.1919 0.2836 0.4043 0.002 1b8z-a1-m1-cA_1b8z-a1-m1-cB
32 1b8z-a1-m1-cA 67 47 0.1919 0.2836 0.4043 0.002 1b8z-a1-m1-cA_1b8z-a1-m1-cB
33 6lmj-a1-m1-cA 99 74 0.2121 0.2121 0.2838 0.008 6lmj-a1-m1-cB_6lmj-a1-m1-cA
34 6lmj-a1-m1-cB 98 74 0.2121 0.2143 0.2838 0.008 6lmj-a1-m1-cB_6lmj-a1-m1-cA
35 2ndp-a1-m1-cB 99 71 0.1717 0.1717 0.2394 0.067 2ndp-a1-m1-cA_2ndp-a1-m1-cB
36 2ndp-a1-m1-cA 99 71 0.1717 0.1717 0.2394 0.067 2ndp-a1-m1-cA_2ndp-a1-m1-cB
37 6l5j-a2-m1-cC 204 47 0.1515 0.0735 0.3191 0.49 6l5j-a2-m1-cD_6l5j-a2-m1-cC
38 6l5j-a2-m1-cD 197 47 0.1515 0.0761 0.3191 0.51 6l5j-a2-m1-cD_6l5j-a2-m1-cC
39 2np2-a1-m1-cB 102 98 0.2121 0.2059 0.2143 1.00 2np2-a1-m1-cA_2np2-a1-m1-cB
40 2np2-a1-m1-cA 102 98 0.2121 0.2059 0.2143 1.00 2np2-a1-m1-cA_2np2-a1-m1-cB
41 4r7y-a1-m3-cB 591 38 0.1414 0.0237 0.3684 1.2 4r7y-a1-m3-cA_4r7y-a1-m3-cB
42 4r7y-a1-m3-cA 591 38 0.1414 0.0237 0.3684 1.2 4r7y-a1-m3-cA_4r7y-a1-m3-cB
43 5vrc-a2-m1-cB 228 68 0.2020 0.0877 0.2941 9.2 5vrc-a2-m1-cD_5vrc-a2-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600