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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
MNKTELIKNVAQNAEISQKEATVVVQTVVESITNTLAAGEKVQLIGFGTFEVRERAARTE
MQIAASKVPAFKAGKELKEAVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3rhi-a2-m1-cD 82 82 1.0000 1.0000 1.0000 1.26e-52 3rhi-a2-m1-cD_3rhi-a2-m1-cC
2 3rhi-a2-m1-cC 90 90 1.0000 0.9111 0.9111 2.20e-49 3rhi-a2-m1-cD_3rhi-a2-m1-cC
3 4qjn-a2-m1-cD 90 90 0.6951 0.6333 0.6333 1.24e-31 4qjn-a2-m1-cB_4qjn-a2-m1-cD
4 4qjn-a2-m1-cB 90 90 0.6951 0.6333 0.6333 1.24e-31 4qjn-a2-m1-cB_4qjn-a2-m1-cD
5 1hue-a1-m1-cB 90 90 0.6707 0.6111 0.6111 5.42e-30 1hue-a1-m1-cA_1hue-a1-m1-cB
6 1hue-a1-m1-cA 90 90 0.6707 0.6111 0.6111 5.42e-30 1hue-a1-m1-cA_1hue-a1-m1-cB
7 5fbm-a1-m1-cA 83 81 0.5976 0.5904 0.6049 1.36e-29 5fbm-a1-m1-cA_5fbm-a1-m1-cB
8 5fbm-a1-m1-cB 83 82 0.5976 0.5904 0.5976 1.18e-27 5fbm-a1-m1-cA_5fbm-a1-m1-cB
9 1huu-a4-m3-cB 74 82 0.6098 0.6757 0.6098 2.64e-26 1huu-a4-m1-cB_1huu-a4-m3-cB
10 1huu-a4-m1-cB 74 82 0.6098 0.6757 0.6098 2.64e-26 1huu-a4-m1-cB_1huu-a4-m3-cB
11 6o8q-a1-m1-cH 91 90 0.5244 0.4725 0.4778 3.37e-22 6o8q-a1-m1-cG_6o8q-a1-m1-cH
12 6o8q-a1-m1-cG 91 90 0.5244 0.4725 0.4778 3.37e-22 6o8q-a1-m1-cG_6o8q-a1-m1-cH
13 5lvt-a2-m1-cD 91 89 0.5732 0.5165 0.5281 2.49e-21 5lvt-a2-m1-cB_5lvt-a2-m1-cD
14 5lvt-a2-m1-cB 91 89 0.5732 0.5165 0.5281 2.49e-21 5lvt-a2-m1-cB_5lvt-a2-m1-cD
15 1p71-a1-m1-cA 94 89 0.4756 0.4149 0.4382 3.53e-20 1p71-a1-m1-cB_1p71-a1-m1-cA
16 1p71-a1-m1-cB 93 89 0.4756 0.4194 0.4382 3.59e-20 1p71-a1-m1-cB_1p71-a1-m1-cA
17 4p3v-a1-m2-cA 72 81 0.4390 0.5000 0.4444 8.08e-19 4p3v-a1-m1-cA_4p3v-a1-m2-cA
18 4p3v-a1-m1-cA 72 81 0.4390 0.5000 0.4444 8.08e-19 4p3v-a1-m1-cA_4p3v-a1-m2-cA
19 5eka-a1-m2-cA 85 82 0.4634 0.4471 0.4634 1.83e-18 5eka-a1-m1-cA_5eka-a1-m2-cA
20 5eka-a1-m1-cA 85 82 0.4634 0.4471 0.4634 1.83e-18 5eka-a1-m1-cA_5eka-a1-m2-cA
21 1b8z-a1-m1-cB 67 82 0.4634 0.5672 0.4634 4.27e-15 1b8z-a1-m1-cA_1b8z-a1-m1-cB
22 1b8z-a1-m1-cA 67 82 0.4634 0.5672 0.4634 4.27e-15 1b8z-a1-m1-cA_1b8z-a1-m1-cB
23 6n2l-a1-m2-cA 88 82 0.4390 0.4091 0.4390 5.85e-14 6n2l-a1-m1-cA_6n2l-a1-m2-cA
24 6n2l-a1-m1-cA 88 82 0.4390 0.4091 0.4390 5.85e-14 6n2l-a1-m1-cA_6n2l-a1-m2-cA
25 5l8z-a1-m2-cA 95 94 0.4634 0.4000 0.4043 1.56e-09 5l8z-a1-m1-cA_5l8z-a1-m2-cA
26 5l8z-a1-m1-cA 95 94 0.4634 0.4000 0.4043 1.56e-09 5l8z-a1-m1-cA_5l8z-a1-m2-cA
27 4dky-a1-m2-cA 97 90 0.3537 0.2990 0.3222 3.78e-09 4dky-a1-m1-cA_4dky-a1-m2-cA
28 4dky-a1-m1-cA 97 90 0.3537 0.2990 0.3222 3.78e-09 4dky-a1-m1-cA_4dky-a1-m2-cA
29 1wtu-a1-m1-cB 99 88 0.4024 0.3333 0.3750 8.68e-09 1wtu-a1-m1-cA_1wtu-a1-m1-cB
30 1wtu-a1-m1-cA 99 88 0.4024 0.3333 0.3750 8.68e-09 1wtu-a1-m1-cA_1wtu-a1-m1-cB
31 1exe-a1-m1-cB 99 88 0.4024 0.3333 0.3750 1.23e-08 1exe-a1-m1-cA_1exe-a1-m1-cB
32 1exe-a1-m1-cA 99 88 0.4024 0.3333 0.3750 1.23e-08 1exe-a1-m1-cA_1exe-a1-m1-cB
33 2np2-a1-m1-cB 102 84 0.3049 0.2451 0.2976 4.03e-07 2np2-a1-m1-cA_2np2-a1-m1-cB
34 2np2-a1-m1-cA 102 84 0.3049 0.2451 0.2976 4.03e-07 2np2-a1-m1-cA_2np2-a1-m1-cB
35 3e3m-a2-m1-cD 270 41 0.1707 0.0519 0.3415 4.7 3e3m-a2-m1-cC_3e3m-a2-m1-cD
36 3e3m-a2-m1-cC 270 41 0.1707 0.0519 0.3415 4.7 3e3m-a2-m1-cC_3e3m-a2-m1-cD
37 2ndp-a1-m1-cB 99 77 0.2317 0.1919 0.2468 9.5 2ndp-a1-m1-cA_2ndp-a1-m1-cB
38 2ndp-a1-m1-cA 99 77 0.2317 0.1919 0.2468 9.5 2ndp-a1-m1-cA_2ndp-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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