Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
MNKTELIKNVAQNAEISQKEATVVVQTVVESITNTLAAGEKVQLIGFGTFEVRERAARTG
RNPQTGEEMQIAASKVPAFKAGKELKEAVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3rhi-a2-m1-cC 90 90 1.0000 1.0000 1.0000 3.79e-59 3rhi-a2-m1-cD_3rhi-a2-m1-cC
2 3rhi-a2-m1-cD 82 90 0.9111 1.0000 0.9111 2.41e-49 3rhi-a2-m1-cD_3rhi-a2-m1-cC
3 4qjn-a2-m1-cD 90 90 0.7111 0.7111 0.7111 8.25e-41 4qjn-a2-m1-cB_4qjn-a2-m1-cD
4 4qjn-a2-m1-cB 90 90 0.7111 0.7111 0.7111 8.25e-41 4qjn-a2-m1-cB_4qjn-a2-m1-cD
5 1hue-a1-m1-cB 90 90 0.7000 0.7000 0.7000 9.01e-40 1hue-a1-m1-cA_1hue-a1-m1-cB
6 1hue-a1-m1-cA 90 90 0.7000 0.7000 0.7000 9.01e-40 1hue-a1-m1-cA_1hue-a1-m1-cB
7 6o8q-a1-m1-cH 91 90 0.5556 0.5495 0.5556 8.40e-32 6o8q-a1-m1-cG_6o8q-a1-m1-cH
8 6o8q-a1-m1-cG 91 90 0.5556 0.5495 0.5556 8.40e-32 6o8q-a1-m1-cG_6o8q-a1-m1-cH
9 5lvt-a2-m1-cD 91 89 0.6111 0.6044 0.6180 2.06e-31 5lvt-a2-m1-cB_5lvt-a2-m1-cD
10 5lvt-a2-m1-cB 91 89 0.6111 0.6044 0.6180 2.06e-31 5lvt-a2-m1-cB_5lvt-a2-m1-cD
11 1p71-a1-m1-cA 94 89 0.5000 0.4787 0.5056 1.89e-28 1p71-a1-m1-cB_1p71-a1-m1-cA
12 1p71-a1-m1-cB 93 89 0.5000 0.4839 0.5056 2.08e-28 1p71-a1-m1-cB_1p71-a1-m1-cA
13 5fbm-a1-m1-cB 83 89 0.5556 0.6024 0.5618 2.68e-27 5fbm-a1-m1-cA_5fbm-a1-m1-cB
14 5fbm-a1-m1-cA 83 89 0.5444 0.5904 0.5506 1.02e-26 5fbm-a1-m1-cA_5fbm-a1-m1-cB
15 1huu-a4-m3-cB 74 90 0.5556 0.6757 0.5556 9.57e-25 1huu-a4-m1-cB_1huu-a4-m3-cB
16 1huu-a4-m1-cB 74 90 0.5556 0.6757 0.5556 9.57e-25 1huu-a4-m1-cB_1huu-a4-m3-cB
17 5l8z-a1-m2-cA 95 88 0.4556 0.4316 0.4659 4.86e-19 5l8z-a1-m1-cA_5l8z-a1-m2-cA
18 5l8z-a1-m1-cA 95 88 0.4556 0.4316 0.4659 4.86e-19 5l8z-a1-m1-cA_5l8z-a1-m2-cA
19 4p3v-a1-m2-cA 72 89 0.4000 0.5000 0.4045 2.33e-17 4p3v-a1-m1-cA_4p3v-a1-m2-cA
20 4p3v-a1-m1-cA 72 89 0.4000 0.5000 0.4045 2.33e-17 4p3v-a1-m1-cA_4p3v-a1-m2-cA
21 5eka-a1-m2-cA 85 90 0.4222 0.4471 0.4222 6.27e-17 5eka-a1-m1-cA_5eka-a1-m2-cA
22 5eka-a1-m1-cA 85 90 0.4222 0.4471 0.4222 6.27e-17 5eka-a1-m1-cA_5eka-a1-m2-cA
23 1wtu-a1-m1-cB 99 88 0.4333 0.3939 0.4432 2.90e-16 1wtu-a1-m1-cA_1wtu-a1-m1-cB
24 1wtu-a1-m1-cA 99 88 0.4333 0.3939 0.4432 2.90e-16 1wtu-a1-m1-cA_1wtu-a1-m1-cB
25 1exe-a1-m1-cB 99 88 0.4333 0.3939 0.4432 4.79e-16 1exe-a1-m1-cA_1exe-a1-m1-cB
26 1exe-a1-m1-cA 99 88 0.4333 0.3939 0.4432 4.79e-16 1exe-a1-m1-cA_1exe-a1-m1-cB
27 4dky-a1-m2-cA 97 89 0.4222 0.3918 0.4270 3.41e-15 4dky-a1-m1-cA_4dky-a1-m2-cA
28 4dky-a1-m1-cA 97 89 0.4222 0.3918 0.4270 3.41e-15 4dky-a1-m1-cA_4dky-a1-m2-cA
29 2np2-a1-m1-cB 102 84 0.3556 0.3137 0.3810 1.38e-14 2np2-a1-m1-cA_2np2-a1-m1-cB
30 2np2-a1-m1-cA 102 84 0.3556 0.3137 0.3810 1.38e-14 2np2-a1-m1-cA_2np2-a1-m1-cB
31 6n2l-a1-m2-cA 88 89 0.4111 0.4205 0.4157 9.19e-14 6n2l-a1-m1-cA_6n2l-a1-m2-cA
32 6n2l-a1-m1-cA 88 89 0.4111 0.4205 0.4157 9.19e-14 6n2l-a1-m1-cA_6n2l-a1-m2-cA
33 1b8z-a1-m1-cB 67 90 0.4222 0.5672 0.4222 1.28e-13 1b8z-a1-m1-cA_1b8z-a1-m1-cB
34 1b8z-a1-m1-cA 67 90 0.4222 0.5672 0.4222 1.28e-13 1b8z-a1-m1-cA_1b8z-a1-m1-cB
35 2ndp-a1-m1-cB 99 89 0.2889 0.2626 0.2921 5.47e-06 2ndp-a1-m1-cA_2ndp-a1-m1-cB
36 2ndp-a1-m1-cA 99 89 0.2889 0.2626 0.2921 5.47e-06 2ndp-a1-m1-cA_2ndp-a1-m1-cB
37 6lmj-a1-m1-cA 99 86 0.3000 0.2727 0.3140 0.005 6lmj-a1-m1-cB_6lmj-a1-m1-cA
38 6lmj-a1-m1-cB 98 86 0.3000 0.2755 0.3140 0.005 6lmj-a1-m1-cB_6lmj-a1-m1-cA
39 3g2p-a1-m1-cB 237 37 0.1667 0.0633 0.4054 1.5 3g2p-a1-m1-cB_3g2p-a1-m1-cA
40 7jw9-a1-m1-cD 378 62 0.2111 0.0503 0.3065 1.7 7jw9-a1-m1-cC_7jw9-a1-m1-cD
41 7jw9-a1-m1-cC 378 62 0.2111 0.0503 0.3065 1.7 7jw9-a1-m1-cA_7jw9-a1-m1-cC, 7jw9-a1-m1-cB_7jw9-a1-m1-cC, 7jw9-a1-m1-cC_7jw9-a1-m1-cD
42 7jw9-a1-m1-cB 378 62 0.2111 0.0503 0.3065 1.7 7jw9-a1-m1-cB_7jw9-a1-m1-cC
43 7jw9-a1-m1-cA 378 62 0.2111 0.0503 0.3065 1.7 7jw9-a1-m1-cA_7jw9-a1-m1-cC
44 3b9o-a3-m1-cB 433 26 0.1111 0.0231 0.3846 2.4 3b9o-a3-m1-cA_3b9o-a3-m1-cB
45 3b9o-a3-m1-cA 433 26 0.1111 0.0231 0.3846 2.4 3b9o-a3-m1-cA_3b9o-a3-m1-cB
46 1ovm-a1-m1-cD 535 53 0.2333 0.0393 0.3962 3.6 1ovm-a1-m1-cB_1ovm-a1-m1-cD, 1ovm-a1-m1-cC_1ovm-a1-m1-cD
47 1ovm-a1-m1-cC 535 53 0.2333 0.0393 0.3962 3.6 1ovm-a1-m1-cC_1ovm-a1-m1-cD
48 1ovm-a1-m1-cB 535 53 0.2333 0.0393 0.3962 3.6 1ovm-a1-m1-cB_1ovm-a1-m1-cD
49 5b46-a1-m2-cA 627 62 0.1889 0.0271 0.2742 5.5 5b46-a1-m1-cA_5b46-a1-m2-cA
50 5b46-a1-m1-cA 627 62 0.1889 0.0271 0.2742 5.5 5b46-a1-m1-cA_5b46-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600