Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKG
RNPQTGEEMEIPASKVPAFKPGKALKDAVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hue-a1-m1-cB 90 90 1.0000 1.0000 1.0000 9.88e-61 1hue-a1-m1-cA_1hue-a1-m1-cB
2 1hue-a1-m1-cA 90 90 1.0000 1.0000 1.0000 9.88e-61 1hue-a1-m1-cA_1hue-a1-m1-cB
3 4qjn-a2-m1-cD 90 90 0.8000 0.8000 0.8000 6.63e-47 4qjn-a2-m1-cB_4qjn-a2-m1-cD
4 4qjn-a2-m1-cB 90 90 0.8000 0.8000 0.8000 6.63e-47 4qjn-a2-m1-cB_4qjn-a2-m1-cD
5 1huu-a4-m3-cB 74 90 0.8222 1.0000 0.8222 1.99e-43 1huu-a4-m1-cB_1huu-a4-m3-cB
6 1huu-a4-m1-cB 74 90 0.8222 1.0000 0.8222 1.99e-43 1huu-a4-m1-cB_1huu-a4-m3-cB
7 3rhi-a2-m1-cC 90 90 0.7000 0.7000 0.7000 9.01e-40 3rhi-a2-m1-cD_3rhi-a2-m1-cC
8 5lvt-a2-m1-cD 91 89 0.6667 0.6593 0.6742 6.99e-36 5lvt-a2-m1-cB_5lvt-a2-m1-cD
9 5lvt-a2-m1-cB 91 89 0.6667 0.6593 0.6742 6.99e-36 5lvt-a2-m1-cB_5lvt-a2-m1-cD
10 6o8q-a1-m1-cH 91 90 0.5889 0.5824 0.5889 2.16e-33 6o8q-a1-m1-cG_6o8q-a1-m1-cH
11 6o8q-a1-m1-cG 91 90 0.5889 0.5824 0.5889 2.16e-33 6o8q-a1-m1-cG_6o8q-a1-m1-cH
12 5fbm-a1-m1-cB 83 89 0.6556 0.7108 0.6629 5.20e-33 5fbm-a1-m1-cA_5fbm-a1-m1-cB
13 5fbm-a1-m1-cA 83 89 0.6444 0.6988 0.6517 3.04e-32 5fbm-a1-m1-cA_5fbm-a1-m1-cB
14 1p71-a1-m1-cA 94 89 0.5444 0.5213 0.5506 1.02e-30 1p71-a1-m1-cB_1p71-a1-m1-cA
15 1p71-a1-m1-cB 93 89 0.5444 0.5269 0.5506 1.19e-30 1p71-a1-m1-cB_1p71-a1-m1-cA
16 3rhi-a2-m1-cD 82 90 0.6111 0.6707 0.6111 5.95e-30 3rhi-a2-m1-cD_3rhi-a2-m1-cC
17 5eka-a1-m2-cA 85 90 0.5111 0.5412 0.5111 1.03e-23 5eka-a1-m1-cA_5eka-a1-m2-cA
18 5eka-a1-m1-cA 85 90 0.5111 0.5412 0.5111 1.03e-23 5eka-a1-m1-cA_5eka-a1-m2-cA
19 5l8z-a1-m2-cA 95 88 0.5222 0.4947 0.5341 5.45e-22 5l8z-a1-m1-cA_5l8z-a1-m2-cA
20 5l8z-a1-m1-cA 95 88 0.5222 0.4947 0.5341 5.45e-22 5l8z-a1-m1-cA_5l8z-a1-m2-cA
21 1exe-a1-m1-cB 99 88 0.4889 0.4444 0.5000 4.34e-21 1exe-a1-m1-cA_1exe-a1-m1-cB
22 1exe-a1-m1-cA 99 88 0.4889 0.4444 0.5000 4.34e-21 1exe-a1-m1-cA_1exe-a1-m1-cB
23 6n2l-a1-m2-cA 88 89 0.4778 0.4886 0.4831 6.89e-20 6n2l-a1-m1-cA_6n2l-a1-m2-cA
24 6n2l-a1-m1-cA 88 89 0.4778 0.4886 0.4831 6.89e-20 6n2l-a1-m1-cA_6n2l-a1-m2-cA
25 4p3v-a1-m2-cA 72 89 0.4444 0.5556 0.4494 1.48e-19 4p3v-a1-m1-cA_4p3v-a1-m2-cA
26 4p3v-a1-m1-cA 72 89 0.4444 0.5556 0.4494 1.48e-19 4p3v-a1-m1-cA_4p3v-a1-m2-cA
27 4dky-a1-m2-cA 97 89 0.4778 0.4433 0.4831 2.39e-19 4dky-a1-m1-cA_4dky-a1-m2-cA
28 4dky-a1-m1-cA 97 89 0.4778 0.4433 0.4831 2.39e-19 4dky-a1-m1-cA_4dky-a1-m2-cA
29 1wtu-a1-m1-cB 99 89 0.5000 0.4545 0.5056 5.76e-19 1wtu-a1-m1-cA_1wtu-a1-m1-cB
30 1wtu-a1-m1-cA 99 89 0.5000 0.4545 0.5056 5.76e-19 1wtu-a1-m1-cA_1wtu-a1-m1-cB
31 1b8z-a1-m1-cB 67 90 0.4556 0.6119 0.4556 5.30e-15 1b8z-a1-m1-cA_1b8z-a1-m1-cB
32 1b8z-a1-m1-cA 67 90 0.4556 0.6119 0.4556 5.30e-15 1b8z-a1-m1-cA_1b8z-a1-m1-cB
33 2np2-a1-m1-cB 102 75 0.3333 0.2941 0.4000 1.17e-12 2np2-a1-m1-cA_2np2-a1-m1-cB
34 2np2-a1-m1-cA 102 75 0.3333 0.2941 0.4000 1.17e-12 2np2-a1-m1-cA_2np2-a1-m1-cB
35 2ndp-a1-m1-cB 99 89 0.2556 0.2323 0.2584 1.33e-04 2ndp-a1-m1-cA_2ndp-a1-m1-cB
36 2ndp-a1-m1-cA 99 89 0.2556 0.2323 0.2584 1.33e-04 2ndp-a1-m1-cA_2ndp-a1-m1-cB
37 6lmj-a1-m1-cA 99 94 0.3333 0.3030 0.3191 5.92e-04 6lmj-a1-m1-cB_6lmj-a1-m1-cA
38 6lmj-a1-m1-cB 98 94 0.3333 0.3061 0.3191 6.08e-04 6lmj-a1-m1-cB_6lmj-a1-m1-cA
39 6k0k-a1-m1-cB 478 35 0.1444 0.0272 0.3714 6.6 6k0k-a1-m1-cB_6k0k-a1-m1-cA
40 6k0k-a1-m1-cA 479 35 0.1444 0.0271 0.3714 6.9 6k0k-a1-m1-cB_6k0k-a1-m1-cA
41 3iaa-a1-m1-cB 388 45 0.1556 0.0361 0.3111 8.4 3iaa-a1-m1-cA_3iaa-a1-m1-cB
42 3iaa-a1-m1-cA 388 45 0.1556 0.0361 0.3111 8.4 3iaa-a1-m1-cA_3iaa-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600