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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAASKV
PAFKPGKALKDAVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1huu-a4-m3-cB 74 74 1.0000 1.0000 1.0000 7.85e-48 1huu-a4-m1-cB_1huu-a4-m3-cB
2 1huu-a4-m1-cB 74 74 1.0000 1.0000 1.0000 7.85e-48 1huu-a4-m1-cB_1huu-a4-m3-cB
3 1hue-a1-m1-cB 90 90 1.0000 0.8222 0.8222 1.63e-43 1hue-a1-m1-cA_1hue-a1-m1-cB
4 1hue-a1-m1-cA 90 90 1.0000 0.8222 0.8222 1.63e-43 1hue-a1-m1-cA_1hue-a1-m1-cB
5 4qjn-a2-m1-cD 90 90 0.7973 0.6556 0.6556 2.37e-31 4qjn-a2-m1-cB_4qjn-a2-m1-cD
6 4qjn-a2-m1-cB 90 90 0.7973 0.6556 0.6556 2.37e-31 4qjn-a2-m1-cB_4qjn-a2-m1-cD
7 5fbm-a1-m1-cA 83 81 0.7162 0.6386 0.6543 1.95e-28 5fbm-a1-m1-cA_5fbm-a1-m1-cB
8 5fbm-a1-m1-cB 83 82 0.7162 0.6386 0.6463 2.95e-28 5fbm-a1-m1-cA_5fbm-a1-m1-cB
9 3rhi-a2-m1-cD 82 82 0.6757 0.6098 0.6098 2.38e-26 3rhi-a2-m1-cD_3rhi-a2-m1-cC
10 3rhi-a2-m1-cC 90 90 0.6757 0.5556 0.5556 7.87e-25 3rhi-a2-m1-cD_3rhi-a2-m1-cC
11 5lvt-a2-m1-cD 91 89 0.6622 0.5385 0.5506 1.03e-22 5lvt-a2-m1-cB_5lvt-a2-m1-cD
12 5lvt-a2-m1-cB 91 89 0.6622 0.5385 0.5506 1.03e-22 5lvt-a2-m1-cB_5lvt-a2-m1-cD
13 4p3v-a1-m2-cA 72 73 0.5405 0.5556 0.5479 3.96e-22 4p3v-a1-m1-cA_4p3v-a1-m2-cA
14 4p3v-a1-m1-cA 72 73 0.5405 0.5556 0.5479 3.96e-22 4p3v-a1-m1-cA_4p3v-a1-m2-cA
15 5eka-a1-m2-cA 85 79 0.5676 0.4941 0.5316 1.17e-21 5eka-a1-m1-cA_5eka-a1-m2-cA
16 5eka-a1-m1-cA 85 79 0.5676 0.4941 0.5316 1.17e-21 5eka-a1-m1-cA_5eka-a1-m2-cA
17 6o8q-a1-m1-cH 91 90 0.5811 0.4725 0.4778 1.08e-20 6o8q-a1-m1-cG_6o8q-a1-m1-cH
18 6o8q-a1-m1-cG 91 90 0.5811 0.4725 0.4778 1.08e-20 6o8q-a1-m1-cG_6o8q-a1-m1-cH
19 1b8z-a1-m1-cB 67 74 0.5541 0.6119 0.5541 8.07e-18 1b8z-a1-m1-cA_1b8z-a1-m1-cB
20 1b8z-a1-m1-cA 67 74 0.5541 0.6119 0.5541 8.07e-18 1b8z-a1-m1-cA_1b8z-a1-m1-cB
21 1p71-a1-m1-cA 94 89 0.5000 0.3936 0.4157 1.96e-16 1p71-a1-m1-cB_1p71-a1-m1-cA
22 1p71-a1-m1-cB 93 89 0.5000 0.3978 0.4157 2.21e-16 1p71-a1-m1-cB_1p71-a1-m1-cA
23 6n2l-a1-m2-cA 88 82 0.5405 0.4545 0.4878 2.95e-16 6n2l-a1-m1-cA_6n2l-a1-m2-cA
24 6n2l-a1-m1-cA 88 82 0.5405 0.4545 0.4878 2.95e-16 6n2l-a1-m1-cA_6n2l-a1-m2-cA
25 4dky-a1-m2-cA 97 90 0.4595 0.3505 0.3778 1.10e-11 4dky-a1-m1-cA_4dky-a1-m2-cA
26 4dky-a1-m1-cA 97 90 0.4595 0.3505 0.3778 1.10e-11 4dky-a1-m1-cA_4dky-a1-m2-cA
27 1exe-a1-m1-cB 99 65 0.4054 0.3030 0.4615 1.38e-10 1exe-a1-m1-cA_1exe-a1-m1-cB
28 1exe-a1-m1-cA 99 65 0.4054 0.3030 0.4615 1.38e-10 1exe-a1-m1-cA_1exe-a1-m1-cB
29 5l8z-a1-m2-cA 95 88 0.5000 0.3895 0.4205 9.17e-09 5l8z-a1-m1-cA_5l8z-a1-m2-cA
30 5l8z-a1-m1-cA 95 88 0.5000 0.3895 0.4205 9.17e-09 5l8z-a1-m1-cA_5l8z-a1-m2-cA
31 1wtu-a1-m1-cB 99 66 0.4189 0.3131 0.4697 1.62e-08 1wtu-a1-m1-cA_1wtu-a1-m1-cB
32 1wtu-a1-m1-cA 99 66 0.4189 0.3131 0.4697 1.62e-08 1wtu-a1-m1-cA_1wtu-a1-m1-cB
33 2np2-a1-m1-cB 102 75 0.2973 0.2157 0.2933 0.001 2np2-a1-m1-cA_2np2-a1-m1-cB
34 2np2-a1-m1-cA 102 75 0.2973 0.2157 0.2933 0.001 2np2-a1-m1-cA_2np2-a1-m1-cB
35 2dw6-a2-m1-cD 388 60 0.2568 0.0490 0.3167 0.41 2dw6-a2-m1-cC_2dw6-a2-m1-cD
36 2dw6-a2-m1-cC 388 60 0.2568 0.0490 0.3167 0.41 2dw6-a2-m1-cC_2dw6-a2-m1-cD
37 6gys-a1-m1-cL 506 62 0.2568 0.0375 0.3065 2.4 6gys-a1-m1-cE_6gys-a1-m1-cL
38 6gys-a1-m1-cE 506 62 0.2568 0.0375 0.3065 2.4 6gys-a1-m1-cE_6gys-a1-m1-cL
39 4nbt-a1-m1-cD 239 77 0.2838 0.0879 0.2727 2.7 4nbt-a1-m1-cA_4nbt-a1-m1-cD, 4nbt-a1-m1-cC_4nbt-a1-m1-cD
40 4nbt-a1-m1-cC 239 77 0.2838 0.0879 0.2727 2.7 4nbt-a1-m1-cC_4nbt-a1-m1-cD
41 4nbt-a1-m1-cA 239 77 0.2838 0.0879 0.2727 2.7 4nbt-a1-m1-cA_4nbt-a1-m1-cD
42 7emg-a1-m1-cA 233 35 0.1757 0.0558 0.3714 3.8 7emg-a1-m1-cA_7emg-a1-m1-cB
43 3e3m-a2-m1-cD 270 25 0.1216 0.0333 0.3600 3.9 3e3m-a2-m1-cC_3e3m-a2-m1-cD
44 3e3m-a2-m1-cC 270 25 0.1216 0.0333 0.3600 3.9 3e3m-a2-m1-cC_3e3m-a2-m1-cD
45 7t2f-a1-m1-cB 53 34 0.1351 0.1887 0.2941 8.1 7t2f-a1-m1-cA_7t2f-a1-m1-cB
46 7t2f-a1-m1-cA 53 34 0.1351 0.1887 0.2941 8.1 7t2f-a1-m1-cA_7t2f-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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