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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
MNNEVVLINNIISQINTHLSQAASDDIILRLLEDKVISEREAKMMVSVMDRSVLHIDLPE
RDELRARMMKAMLTSLKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6fh4-a2-m1-cC 78 78 1.0000 1.0000 1.0000 1.25e-49 6fh4-a2-m1-cD_6fh4-a2-m1-cC
2 6fh4-a2-m1-cD 76 76 0.9744 1.0000 1.0000 2.18e-48 6fh4-a2-m1-cD_6fh4-a2-m1-cC
3 3h0d-a1-m1-cB 143 76 0.5513 0.3007 0.5658 3.01e-18 3h0d-a1-m1-cB_3h0d-a1-m1-cA
4 3h0d-a1-m1-cA 147 77 0.5513 0.2925 0.5584 3.76e-18 3h0d-a1-m1-cB_3h0d-a1-m1-cA
5 7r8d-a1-m1-cB 545 38 0.2051 0.0294 0.4211 0.43 7r8d-a1-m1-cA_7r8d-a1-m1-cB
6 7r8d-a1-m1-cA 545 38 0.2051 0.0294 0.4211 0.43 7r8d-a1-m1-cA_7r8d-a1-m1-cB
7 5dd8-a1-m1-cB 156 41 0.1667 0.0833 0.3171 4.7 5dd8-a1-m1-cA_5dd8-a1-m1-cB
8 5dd8-a1-m1-cA 156 41 0.1667 0.0833 0.3171 4.7 5dd8-a1-m1-cA_5dd8-a1-m1-cB
9 3do6-a1-m2-cB 530 36 0.1923 0.0283 0.4167 5.6 3do6-a1-m1-cA_3do6-a1-m2-cB, 3do6-a1-m2-cA_3do6-a1-m2-cB
10 3do6-a1-m2-cA 530 36 0.1923 0.0283 0.4167 5.6 3do6-a1-m2-cA_3do6-a1-m2-cB
11 3do6-a1-m1-cA 530 36 0.1923 0.0283 0.4167 5.6 3do6-a1-m1-cA_3do6-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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