Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=74)
MNVPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAI
PGLNDSHIHVIRGL

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3ggm-a1-m1-cD 75 74 1.0000 0.9867 1.0000 3.98e-49 3ggm-a1-m1-cA_3ggm-a1-m1-cD, 3ggm-a1-m1-cB_3ggm-a1-m1-cD, 3ggm-a1-m1-cC_3ggm-a1-m1-cD
2 3ggm-a1-m1-cA 75 74 1.0000 0.9867 1.0000 3.98e-49 3ggm-a1-m1-cA_3ggm-a1-m1-cD
3 3ggm-a1-m1-cC 74 74 1.0000 1.0000 1.0000 4.46e-49 3ggm-a1-m1-cC_3ggm-a1-m1-cD
4 3ggm-a1-m1-cB 74 74 1.0000 1.0000 1.0000 4.46e-49 3ggm-a1-m1-cB_3ggm-a1-m1-cD
5 2vun-a1-m1-cD 385 65 0.3784 0.0727 0.4308 4.70e-07 2vun-a1-m1-cB_2vun-a1-m1-cD, 2vun-a1-m1-cC_2vun-a1-m1-cD
6 2vun-a1-m1-cC 385 65 0.3784 0.0727 0.4308 4.70e-07 2vun-a1-m1-cC_2vun-a1-m1-cD
7 2vun-a1-m1-cB 385 65 0.3784 0.0727 0.4308 4.70e-07 2vun-a1-m1-cB_2vun-a1-m1-cD
8 7ww2-a1-m1-cA 451 64 0.2973 0.0488 0.3438 8.33e-04 7ww2-a1-m1-cB_7ww2-a1-m1-cA
9 7ww2-a1-m1-cB 448 64 0.2973 0.0491 0.3438 8.49e-04 7ww2-a1-m1-cB_7ww2-a1-m1-cA
10 3mkv-a1-m1-cH 412 59 0.3108 0.0558 0.3898 0.005 3mkv-a1-m1-cC_3mkv-a1-m1-cH, 3mkv-a1-m1-cE_3mkv-a1-m1-cH, 3mkv-a1-m1-cF_3mkv-a1-m1-cH
11 3mkv-a1-m1-cF 412 59 0.3108 0.0558 0.3898 0.005 3mkv-a1-m1-cF_3mkv-a1-m1-cH
12 3mkv-a1-m1-cE 412 59 0.3108 0.0558 0.3898 0.005 3mkv-a1-m1-cE_3mkv-a1-m1-cH
13 3mkv-a1-m1-cC 412 59 0.3108 0.0558 0.3898 0.005 3mkv-a1-m1-cC_3mkv-a1-m1-cH
14 1gkr-a1-m1-cD 450 67 0.2703 0.0444 0.2985 0.005 1gkr-a1-m1-cB_1gkr-a1-m1-cD, 1gkr-a1-m1-cC_1gkr-a1-m1-cD
15 1gkr-a1-m1-cC 450 67 0.2703 0.0444 0.2985 0.005 1gkr-a1-m1-cC_1gkr-a1-m1-cD
16 1gkr-a1-m1-cB 450 67 0.2703 0.0444 0.2985 0.005 1gkr-a1-m1-cB_1gkr-a1-m1-cD
17 3igh-a1-m2-cX 483 65 0.2838 0.0435 0.3231 0.006 3igh-a1-m1-cX_3igh-a1-m2-cX
18 3igh-a1-m1-cX 483 65 0.2838 0.0435 0.3231 0.006 3igh-a1-m1-cX_3igh-a1-m2-cX
19 2ood-a1-m2-cA 453 46 0.2027 0.0331 0.3261 0.012 2ood-a1-m1-cA_2ood-a1-m2-cA
20 2ood-a1-m1-cA 453 46 0.2027 0.0331 0.3261 0.012 2ood-a1-m1-cA_2ood-a1-m2-cA
21 3hpa-a3-m1-cB 428 65 0.2973 0.0514 0.3385 0.24 3hpa-a3-m1-cA_3hpa-a3-m1-cB
22 3hpa-a3-m1-cA 428 65 0.2973 0.0514 0.3385 0.24 3hpa-a3-m1-cA_3hpa-a3-m1-cB
23 3ls9-a1-m1-cB 453 71 0.3108 0.0508 0.3239 0.27 3ls9-a1-m1-cA_3ls9-a1-m1-cB
24 3ls9-a1-m1-cA 453 71 0.3108 0.0508 0.3239 0.27 3ls9-a1-m1-cA_3ls9-a1-m1-cB
25 3mtw-a2-m8-cA 402 47 0.2432 0.0448 0.3830 0.28 3mtw-a2-m4-cA_3mtw-a2-m8-cA, 3mtw-a2-m5-cA_3mtw-a2-m8-cA, 3mtw-a2-m6-cA_3mtw-a2-m8-cA
26 3mtw-a2-m6-cA 402 47 0.2432 0.0448 0.3830 0.28 3mtw-a2-m6-cA_3mtw-a2-m8-cA
27 3mtw-a2-m5-cA 402 47 0.2432 0.0448 0.3830 0.28 3mtw-a2-m5-cA_3mtw-a2-m8-cA
28 3mtw-a2-m4-cA 402 47 0.2432 0.0448 0.3830 0.28 3mtw-a2-m4-cA_3mtw-a2-m8-cA
29 2i9u-a1-m1-cB 419 46 0.2162 0.0382 0.3478 1.2 2i9u-a1-m1-cA_2i9u-a1-m1-cB
30 2i9u-a1-m1-cA 419 46 0.2162 0.0382 0.3478 1.2 2i9u-a1-m1-cA_2i9u-a1-m1-cB
31 2vr2-a1-m4-cA 478 65 0.2297 0.0356 0.2615 1.9 2vr2-a1-m2-cA_2vr2-a1-m4-cA, 2vr2-a1-m3-cA_2vr2-a1-m4-cA
32 2vr2-a1-m3-cA 478 65 0.2297 0.0356 0.2615 1.9 2vr2-a1-m3-cA_2vr2-a1-m4-cA
33 2vr2-a1-m2-cA 478 65 0.2297 0.0356 0.2615 1.9 2vr2-a1-m2-cA_2vr2-a1-m4-cA
34 2dv6-a1-m1-cF 422 41 0.1622 0.0284 0.2927 2.8 2dv6-a1-m1-cB_2dv6-a1-m1-cF, 2dv6-a1-m1-cE_2dv6-a1-m1-cF
35 2dv6-a1-m1-cE 422 41 0.1622 0.0284 0.2927 2.8 2dv6-a1-m1-cE_2dv6-a1-m1-cF
36 2dv6-a1-m1-cB 422 41 0.1622 0.0284 0.2927 2.8 2dv6-a1-m1-cB_2dv6-a1-m1-cF
37 3n2c-a1-m1-cG 407 22 0.1216 0.0221 0.4091 3.4 3n2c-a1-m1-cA_3n2c-a1-m1-cG, 3n2c-a1-m1-cD_3n2c-a1-m1-cG, 3n2c-a1-m1-cE_3n2c-a1-m1-cG
38 3n2c-a1-m1-cE 407 22 0.1216 0.0221 0.4091 3.4 3n2c-a1-m1-cE_3n2c-a1-m1-cG
39 3n2c-a1-m1-cD 407 22 0.1216 0.0221 0.4091 3.4 3n2c-a1-m1-cD_3n2c-a1-m1-cG
40 3n2c-a1-m1-cA 407 22 0.1216 0.0221 0.4091 3.4 3n2c-a1-m1-cA_3n2c-a1-m1-cG
41 3dug-a1-m1-cG 393 12 0.1081 0.0204 0.6667 6.3 3dug-a1-m1-cA_3dug-a1-m1-cG, 3dug-a1-m1-cE_3dug-a1-m1-cG
42 3dug-a1-m1-cE 393 12 0.1081 0.0204 0.6667 6.3 3dug-a1-m1-cE_3dug-a1-m1-cG
43 3dug-a1-m1-cA 393 12 0.1081 0.0204 0.6667 6.3 3dug-a1-m1-cA_3dug-a1-m1-cG
44 3be7-a1-m1-cC 394 12 0.1081 0.0203 0.6667 6.3 3be7-a1-m1-cC_3be7-a1-m1-cH
45 2g3f-a3-m2-cB 414 82 0.2973 0.0531 0.2683 6.4 2g3f-a3-m1-cA_2g3f-a3-m2-cB
46 2g3f-a3-m1-cA 414 82 0.2973 0.0531 0.2683 6.4 2g3f-a3-m1-cA_2g3f-a3-m2-cB
47 3be7-a1-m1-cH 395 12 0.1081 0.0203 0.6667 6.4 3be7-a1-m1-cC_3be7-a1-m1-cH
48 2aqv-a1-m4-cA 374 22 0.1216 0.0241 0.4091 8.8 2aqv-a1-m4-cA_2aqv-a1-m4-cB
49 2aqv-a1-m1-cA 374 22 0.1216 0.0241 0.4091 8.8 2aqv-a1-m1-cA_2aqv-a1-m4-cB
50 2aqv-a1-m4-cB 374 22 0.1216 0.0241 0.4091 8.9 2aqv-a1-m1-cA_2aqv-a1-m4-cB, 2aqv-a1-m2-cB_2aqv-a1-m4-cB, 2aqv-a1-m4-cA_2aqv-a1-m4-cB
51 2aqv-a1-m2-cB 374 22 0.1216 0.0241 0.4091 8.9 2aqv-a1-m2-cB_2aqv-a1-m4-cB
52 5lp3-a1-m1-cD 373 22 0.1216 0.0241 0.4091 9.1 5lp3-a1-m1-cD_5lp3-a1-m1-cL
53 5lp3-a1-m1-cL 376 22 0.1216 0.0239 0.4091 9.4 5lp3-a1-m1-cD_5lp3-a1-m1-cL
54 2zws-a2-m2-cA 630 55 0.2568 0.0302 0.3455 10.0 2zws-a2-m1-cA_2zws-a2-m2-cA
55 2zws-a2-m1-cA 630 55 0.2568 0.0302 0.3455 10.0 2zws-a2-m1-cA_2zws-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600