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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
MNVPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAI
PGLNDSHIHVIRGLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ggm-a1-m1-cD 75 75 1.0000 1.0000 1.0000 6.93e-50 3ggm-a1-m1-cA_3ggm-a1-m1-cD, 3ggm-a1-m1-cB_3ggm-a1-m1-cD, 3ggm-a1-m1-cC_3ggm-a1-m1-cD
2 3ggm-a1-m1-cA 75 75 1.0000 1.0000 1.0000 6.93e-50 3ggm-a1-m1-cA_3ggm-a1-m1-cD
3 3ggm-a1-m1-cC 74 74 0.9867 1.0000 1.0000 4.04e-49 3ggm-a1-m1-cC_3ggm-a1-m1-cD
4 3ggm-a1-m1-cB 74 74 0.9867 1.0000 1.0000 4.04e-49 3ggm-a1-m1-cB_3ggm-a1-m1-cD
5 2vun-a1-m1-cD 385 65 0.3733 0.0727 0.4308 4.52e-07 2vun-a1-m1-cB_2vun-a1-m1-cD, 2vun-a1-m1-cC_2vun-a1-m1-cD
6 2vun-a1-m1-cC 385 65 0.3733 0.0727 0.4308 4.52e-07 2vun-a1-m1-cC_2vun-a1-m1-cD
7 2vun-a1-m1-cB 385 65 0.3733 0.0727 0.4308 4.52e-07 2vun-a1-m1-cB_2vun-a1-m1-cD
8 7ww2-a1-m1-cA 451 64 0.2933 0.0488 0.3438 8.47e-04 7ww2-a1-m1-cB_7ww2-a1-m1-cA
9 7ww2-a1-m1-cB 448 64 0.2933 0.0491 0.3438 8.64e-04 7ww2-a1-m1-cB_7ww2-a1-m1-cA
10 3mkv-a1-m1-cH 412 59 0.3067 0.0558 0.3898 0.005 3mkv-a1-m1-cC_3mkv-a1-m1-cH, 3mkv-a1-m1-cE_3mkv-a1-m1-cH, 3mkv-a1-m1-cF_3mkv-a1-m1-cH
11 3mkv-a1-m1-cF 412 59 0.3067 0.0558 0.3898 0.005 3mkv-a1-m1-cF_3mkv-a1-m1-cH
12 3mkv-a1-m1-cE 412 59 0.3067 0.0558 0.3898 0.005 3mkv-a1-m1-cE_3mkv-a1-m1-cH
13 3mkv-a1-m1-cC 412 59 0.3067 0.0558 0.3898 0.005 3mkv-a1-m1-cC_3mkv-a1-m1-cH
14 3igh-a1-m2-cX 483 65 0.2800 0.0435 0.3231 0.005 3igh-a1-m1-cX_3igh-a1-m2-cX
15 3igh-a1-m1-cX 483 65 0.2800 0.0435 0.3231 0.005 3igh-a1-m1-cX_3igh-a1-m2-cX
16 1gkr-a1-m1-cD 450 67 0.2667 0.0444 0.2985 0.006 1gkr-a1-m1-cB_1gkr-a1-m1-cD, 1gkr-a1-m1-cC_1gkr-a1-m1-cD
17 1gkr-a1-m1-cC 450 67 0.2667 0.0444 0.2985 0.006 1gkr-a1-m1-cC_1gkr-a1-m1-cD
18 1gkr-a1-m1-cB 450 67 0.2667 0.0444 0.2985 0.006 1gkr-a1-m1-cB_1gkr-a1-m1-cD
19 2ood-a1-m2-cA 453 46 0.2000 0.0331 0.3261 0.013 2ood-a1-m1-cA_2ood-a1-m2-cA
20 2ood-a1-m1-cA 453 46 0.2000 0.0331 0.3261 0.013 2ood-a1-m1-cA_2ood-a1-m2-cA
21 3mtw-a2-m8-cA 402 47 0.2400 0.0448 0.3830 0.24 3mtw-a2-m4-cA_3mtw-a2-m8-cA, 3mtw-a2-m5-cA_3mtw-a2-m8-cA, 3mtw-a2-m6-cA_3mtw-a2-m8-cA
22 3mtw-a2-m6-cA 402 47 0.2400 0.0448 0.3830 0.24 3mtw-a2-m6-cA_3mtw-a2-m8-cA
23 3mtw-a2-m5-cA 402 47 0.2400 0.0448 0.3830 0.24 3mtw-a2-m5-cA_3mtw-a2-m8-cA
24 3mtw-a2-m4-cA 402 47 0.2400 0.0448 0.3830 0.24 3mtw-a2-m4-cA_3mtw-a2-m8-cA
25 3hpa-a3-m1-cB 428 65 0.2933 0.0514 0.3385 0.24 3hpa-a3-m1-cA_3hpa-a3-m1-cB
26 3hpa-a3-m1-cA 428 65 0.2933 0.0514 0.3385 0.24 3hpa-a3-m1-cA_3hpa-a3-m1-cB
27 3ls9-a1-m1-cB 453 71 0.3067 0.0508 0.3239 0.27 3ls9-a1-m1-cA_3ls9-a1-m1-cB
28 3ls9-a1-m1-cA 453 71 0.3067 0.0508 0.3239 0.27 3ls9-a1-m1-cA_3ls9-a1-m1-cB
29 2i9u-a1-m1-cB 419 46 0.2133 0.0382 0.3478 1.1 2i9u-a1-m1-cA_2i9u-a1-m1-cB
30 2i9u-a1-m1-cA 419 46 0.2133 0.0382 0.3478 1.1 2i9u-a1-m1-cA_2i9u-a1-m1-cB
31 2vr2-a1-m4-cA 478 65 0.2267 0.0356 0.2615 1.9 2vr2-a1-m2-cA_2vr2-a1-m4-cA, 2vr2-a1-m3-cA_2vr2-a1-m4-cA
32 2vr2-a1-m3-cA 478 65 0.2267 0.0356 0.2615 1.9 2vr2-a1-m3-cA_2vr2-a1-m4-cA
33 2vr2-a1-m2-cA 478 65 0.2267 0.0356 0.2615 1.9 2vr2-a1-m2-cA_2vr2-a1-m4-cA
34 2dv6-a1-m1-cF 422 41 0.1600 0.0284 0.2927 2.9 2dv6-a1-m1-cB_2dv6-a1-m1-cF, 2dv6-a1-m1-cE_2dv6-a1-m1-cF
35 2dv6-a1-m1-cE 422 41 0.1600 0.0284 0.2927 2.9 2dv6-a1-m1-cE_2dv6-a1-m1-cF
36 2dv6-a1-m1-cB 422 41 0.1600 0.0284 0.2927 2.9 2dv6-a1-m1-cB_2dv6-a1-m1-cF
37 3n2c-a1-m1-cG 407 22 0.1200 0.0221 0.4091 3.6 3n2c-a1-m1-cA_3n2c-a1-m1-cG, 3n2c-a1-m1-cD_3n2c-a1-m1-cG, 3n2c-a1-m1-cE_3n2c-a1-m1-cG
38 3n2c-a1-m1-cE 407 22 0.1200 0.0221 0.4091 3.6 3n2c-a1-m1-cE_3n2c-a1-m1-cG
39 3n2c-a1-m1-cD 407 22 0.1200 0.0221 0.4091 3.6 3n2c-a1-m1-cD_3n2c-a1-m1-cG
40 3n2c-a1-m1-cA 407 22 0.1200 0.0221 0.4091 3.6 3n2c-a1-m1-cA_3n2c-a1-m1-cG
41 3dug-a1-m1-cG 393 12 0.1067 0.0204 0.6667 6.5 3dug-a1-m1-cA_3dug-a1-m1-cG, 3dug-a1-m1-cE_3dug-a1-m1-cG
42 3dug-a1-m1-cE 393 12 0.1067 0.0204 0.6667 6.5 3dug-a1-m1-cE_3dug-a1-m1-cG
43 3dug-a1-m1-cA 393 12 0.1067 0.0204 0.6667 6.5 3dug-a1-m1-cA_3dug-a1-m1-cG
44 3be7-a1-m1-cC 394 12 0.1067 0.0203 0.6667 6.5 3be7-a1-m1-cC_3be7-a1-m1-cH
45 3be7-a1-m1-cH 395 12 0.1067 0.0203 0.6667 6.5 3be7-a1-m1-cC_3be7-a1-m1-cH
46 2g3f-a3-m2-cB 414 82 0.2933 0.0531 0.2683 6.6 2g3f-a3-m1-cA_2g3f-a3-m2-cB
47 2g3f-a3-m1-cA 414 82 0.2933 0.0531 0.2683 6.6 2g3f-a3-m1-cA_2g3f-a3-m2-cB
48 2aqv-a1-m4-cA 374 22 0.1200 0.0241 0.4091 8.9 2aqv-a1-m4-cA_2aqv-a1-m4-cB
49 2aqv-a1-m1-cA 374 22 0.1200 0.0241 0.4091 8.9 2aqv-a1-m1-cA_2aqv-a1-m4-cB
50 5lp3-a1-m1-cD 373 22 0.1200 0.0241 0.4091 9.0 5lp3-a1-m1-cD_5lp3-a1-m1-cL
51 2aqv-a1-m4-cB 374 22 0.1200 0.0241 0.4091 9.0 2aqv-a1-m1-cA_2aqv-a1-m4-cB, 2aqv-a1-m2-cB_2aqv-a1-m4-cB, 2aqv-a1-m4-cA_2aqv-a1-m4-cB
52 2aqv-a1-m2-cB 374 22 0.1200 0.0241 0.4091 9.0 2aqv-a1-m2-cB_2aqv-a1-m4-cB
53 5lp3-a1-m1-cL 376 22 0.1200 0.0239 0.4091 9.3 5lp3-a1-m1-cD_5lp3-a1-m1-cL

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Reference:
Jacob Schwartz et al.

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