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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
MNYKELEKMLDVIFENSEIKEIDLFFDPEVEISKQEFEDLVKNADPLQKVVGDNYITETF
EWWEFENQYLEFELDYYVKDEKIFVLEMHFWRKIRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6thh-a1-m2-cB 96 96 1.0000 1.0000 1.0000 4.94e-64 6thh-a1-m2-cA_6thh-a1-m2-cB
2 6thh-a1-m2-cA 96 96 1.0000 1.0000 1.0000 4.94e-64 6thh-a1-m2-cA_6thh-a1-m2-cB
3 5jnq-a1-m2-cA 307 27 0.1146 0.0358 0.4074 0.56 5jnq-a1-m1-cA_5jnq-a1-m2-cA
4 5jnq-a1-m1-cA 307 27 0.1146 0.0358 0.4074 0.56 5jnq-a1-m1-cA_5jnq-a1-m2-cA
5 2hi9-a1-m1-cA 356 56 0.1875 0.0506 0.3214 1.9 2hi9-a1-m1-cB_2hi9-a1-m1-cA, 2hi9-a1-m1-cC_2hi9-a1-m1-cA
6 2hi9-a1-m1-cB 354 56 0.1875 0.0508 0.3214 2.0 2hi9-a1-m1-cB_2hi9-a1-m1-cA, 2hi9-a1-m1-cC_2hi9-a1-m1-cB
7 2hi9-a1-m1-cC 346 56 0.1875 0.0520 0.3214 2.5 2hi9-a1-m1-cC_2hi9-a1-m1-cA, 2hi9-a1-m1-cC_2hi9-a1-m1-cB
8 4bjh-a1-m6-cA 422 30 0.1354 0.0308 0.4333 8.4 4bjh-a1-m2-cA_4bjh-a1-m6-cA, 4bjh-a1-m3-cA_4bjh-a1-m6-cA
9 4bjh-a1-m3-cA 422 30 0.1354 0.0308 0.4333 8.4 4bjh-a1-m3-cA_4bjh-a1-m6-cA
10 4bjh-a1-m2-cA 422 30 0.1354 0.0308 0.4333 8.4 4bjh-a1-m2-cA_4bjh-a1-m6-cA
11 4ly4-a1-m1-cD 290 53 0.1562 0.0517 0.2830 9.3 4ly4-a1-m1-cC_4ly4-a1-m1-cD
12 4ly4-a1-m1-cC 290 53 0.1562 0.0517 0.2830 9.3 4ly4-a1-m1-cC_4ly4-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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