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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
MPITSKYTDEQVEKILAEVALVLEKHAASPELTLMIAGNIATNVLNQRVAASQRKLIAEK
FAQALMSSLETPKTHLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2jpq-a1-m1-cB 83 83 1.0000 1.0000 1.0000 1.80e-55 2jpq-a1-m1-cA_2jpq-a1-m1-cB
2 2jpq-a1-m1-cA 83 83 1.0000 1.0000 1.0000 1.80e-55 2jpq-a1-m1-cA_2jpq-a1-m1-cB
3 2jrx-a1-m1-cB 83 78 0.5060 0.5060 0.5385 1.75e-23 2jrx-a1-m1-cA_2jrx-a1-m1-cB
4 2jrx-a1-m1-cA 83 78 0.5060 0.5060 0.5385 1.75e-23 2jrx-a1-m1-cA_2jrx-a1-m1-cB
5 2juz-a1-m1-cB 80 67 0.3012 0.3125 0.3731 1.53e-10 2juz-a1-m1-cA_2juz-a1-m1-cB
6 2juz-a1-m1-cA 80 67 0.3012 0.3125 0.3731 1.53e-10 2juz-a1-m1-cA_2juz-a1-m1-cB
7 2qti-a1-m2-cA 66 70 0.3494 0.4394 0.4143 1.60e-10 2qti-a1-m1-cA_2qti-a1-m2-cA
8 2qti-a1-m1-cA 66 70 0.3494 0.4394 0.4143 1.60e-10 2qti-a1-m1-cA_2qti-a1-m2-cA
9 2ota-a1-m1-cA 66 74 0.3494 0.4394 0.3919 5.69e-09 2ota-a1-m1-cB_2ota-a1-m1-cA
10 2ota-a1-m1-cB 60 61 0.2771 0.3833 0.3770 2.46e-05 2ota-a1-m1-cB_2ota-a1-m1-cA
11 4ic6-a1-m2-cC 335 18 0.1446 0.0358 0.6667 2.7 4ic6-a1-m2-cC_4ic6-a1-m2-cA
12 4ic6-a1-m2-cA 340 18 0.1446 0.0353 0.6667 2.7 4ic6-a1-m2-cC_4ic6-a1-m2-cA
13 4ic6-a1-m1-cA 340 18 0.1446 0.0353 0.6667 2.7 4ic6-a1-m2-cB_4ic6-a1-m1-cA
14 7x4t-a2-m1-cA 298 18 0.0964 0.0268 0.4444 9.4 7x4t-a2-m1-cB_7x4t-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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