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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
MPKIIEAVYENGVFKPLQKVDLKEGERVKIKLELKVEPIDLGEPVSVEEIKKIRDGTWMS
SLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2nwt-a1-m1-cB 69 69 1.0000 1.0000 1.0000 1.39e-44 2nwt-a1-m1-cA_2nwt-a1-m1-cB
2 2nwt-a1-m1-cA 69 69 1.0000 1.0000 1.0000 1.39e-44 2nwt-a1-m1-cA_2nwt-a1-m1-cB
3 4ic6-a1-m2-cA 340 44 0.2464 0.0500 0.3864 0.075 4ic6-a1-m2-cC_4ic6-a1-m2-cA
4 4ic6-a1-m1-cA 340 44 0.2464 0.0500 0.3864 0.075 4ic6-a1-m2-cB_4ic6-a1-m1-cA
5 4ic6-a1-m2-cC 335 44 0.2464 0.0507 0.3864 0.080 4ic6-a1-m2-cC_4ic6-a1-m2-cA
6 4ney-a1-m1-cA 163 58 0.3043 0.1288 0.3621 0.52 4ney-a1-m1-cA_4ney-a1-m1-cB
7 3s8k-a1-m1-cB 182 31 0.1594 0.0604 0.3548 0.87 3s8k-a1-m1-cB_3s8k-a1-m1-cA
8 3s8k-a1-m1-cA 183 31 0.1594 0.0601 0.3548 0.88 3s8k-a1-m1-cB_3s8k-a1-m1-cA
9 4mem-a3-m2-cB 216 15 0.1304 0.0417 0.6000 2.0 4mem-a3-m1-cA_4mem-a3-m2-cB
10 3hv1-a1-m1-cA 259 29 0.1594 0.0425 0.3793 2.8 3hv1-a1-m1-cB_3hv1-a1-m1-cA
11 3nib-a1-m2-cA 238 17 0.1304 0.0378 0.5294 3.5 3nib-a1-m1-cA_3nib-a1-m2-cA
12 3nib-a1-m1-cA 238 17 0.1304 0.0378 0.5294 3.5 3nib-a1-m1-cA_3nib-a1-m2-cA
13 3wit-a1-m3-cA 63 64 0.2609 0.2857 0.2812 4.9 3wit-a1-m2-cA_3wit-a1-m3-cA
14 3wit-a1-m2-cA 63 64 0.2609 0.2857 0.2812 4.9 3wit-a1-m2-cA_3wit-a1-m3-cA
15 3mgc-a2-m2-cA 255 17 0.1304 0.0353 0.5294 7.7 3mgc-a2-m1-cA_3mgc-a2-m2-cA
16 3mgc-a2-m1-cA 255 17 0.1304 0.0353 0.5294 7.7 3mgc-a2-m1-cA_3mgc-a2-m2-cA
17 8hcr-a1-m1-cN 524 35 0.1304 0.0172 0.2571 7.7 8hcr-a1-m1-cB_8hcr-a1-m1-cN
18 8hcr-a1-m1-cB 524 35 0.1304 0.0172 0.2571 7.7 8hcr-a1-m1-cB_8hcr-a1-m1-cN
19 3fcd-a1-m1-cB 116 60 0.2609 0.1552 0.3000 7.8 3fcd-a1-m1-cA_3fcd-a1-m1-cB
20 3mg9-a1-m2-cA 255 17 0.1304 0.0353 0.5294 8.8 3mg9-a1-m1-cA_3mg9-a1-m2-cA
21 3mg9-a1-m1-cA 255 17 0.1304 0.0353 0.5294 8.8 3mg9-a1-m1-cA_3mg9-a1-m2-cA
22 3mgb-a1-m1-cA 286 17 0.1304 0.0315 0.5294 9.3 3mgb-a1-m1-cB_3mgb-a1-m1-cA
23 3mgb-a1-m1-cB 264 17 0.1304 0.0341 0.5294 9.4 3mgb-a1-m1-cB_3mgb-a1-m1-cA
24 6w8p-a1-m1-cA 418 24 0.1449 0.0239 0.4167 9.6 6w8p-a1-m1-cA_6w8p-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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